File Info
- Filename
- Quality_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0032/A2327GFLT3/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L006/Reports/Quality_Metrics.csv
- Size
- 1.5 KB
- Workflow Run
- cgp_rna_exp0032_73d51683
- Published
- Jun 07, 2026 11:11 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 6 | rna_s1804 | CTGATCGT | GCGCATAT | 1 | 9079268657 | 8338471826 | 347867481830 | 38.31 | 0.92 |
| 6 | rna_s1804 | CTGATCGT | GCGCATAT | 2 | 9079268657 | 8140835946 | 343315284735 | 37.81 | 0.90 |
| 6 | rna_s1805 | ACTCTCGA | CTGTACCA | 1 | 10293659430 | 9411276737 | 393380064386 | 38.22 | 0.91 |
| 6 | rna_s1805 | ACTCTCGA | CTGTACCA | 2 | 10293659430 | 9203393417 | 388645591505 | 37.76 | 0.89 |
| 6 | rna_s1806 | TGAGCTAG | GAACGGTT | 1 | 10517473895 | 9665472187 | 403126322428 | 38.33 | 0.92 |
| 6 | rna_s1806 | TGAGCTAG | GAACGGTT | 2 | 10517473895 | 9499844053 | 399344469112 | 37.97 | 0.90 |
| 6 | rna_s1807 | GAGACGAT | ACCGGTTA | 1 | 8376904992 | 7702607368 | 321165130036 | 38.34 | 0.92 |
| 6 | rna_s1807 | GAGACGAT | ACCGGTTA | 2 | 8376904992 | 7513937362 | 316894484305 | 37.83 | 0.90 |
| 6 | rna_s1808 | CTTGTCGA | CGATGTTC | 1 | 11306914277 | 10337343232 | 432157507492 | 38.22 | 0.91 |
| 6 | rna_s1808 | CTTGTCGA | CGATGTTC | 2 | 11306914277 | 10143938751 | 427749805380 | 37.83 | 0.90 |
| 6 | rna_s1809 | TTCCAAGG | CTACAAGG | 1 | 10346002070 | 9446168294 | 395166770081 | 38.20 | 0.91 |
| 6 | rna_s1809 | TTCCAAGG | CTACAAGG | 2 | 10346002070 | 9301525823 | 391860840164 | 37.88 | 0.90 |
| 6 | rna_s1810 | CGCATGAT | AAGCCTGA | 1 | 8766706660 | 8061972022 | 336080203234 | 38.34 | 0.92 |
| 6 | rna_s1810 | CGCATGAT | AAGCCTGA | 2 | 8766706660 | 7900156824 | 332323131321 | 37.91 | 0.90 |
| 6 | rna_s1811 | ACGGAACA | ACGAGAAC | 1 | 6888506297 | 6334153107 | 264104403108 | 38.34 | 0.92 |
| 6 | rna_s1811 | ACGGAACA | ACGAGAAC | 2 | 6888506297 | 6200162862 | 261067818837 | 37.90 | 0.90 |
| 6 | Undetermined | 1 | 123603236933 | 106195654984 | 4556808304795 | 36.87 | 0.86 | ||
| 6 | Undetermined | 2 | 123603236933 | 103194029000 | 4482418983983 | 36.26 | 0.83 |
19 rows