File Info
- Filename
- Index_Hopping_Counts.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0032/A2327GFLT3/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L007/Reports/Index_Hopping_Counts.csv
- Size
- 2.9 KB
- Workflow Run
- cgp_rna_exp0032_73d51683
- Published
- Jun 07, 2026 11:11 PM
Content
View in new tab| Lane | SampleID | index | index2 | # Reads | % of Hopped Reads | % of All Reads |
| 7 | rna_s1804 | CTGATCGT | GCGCATAT | 60502339 | 0.045542 | |
| 7 | rna_s1805 | ACTCTCGA | CTGTACCA | 68512299 | 0.051571 | |
| 7 | rna_s1806 | TGAGCTAG | GAACGGTT | 69998800 | 0.052690 | |
| 7 | rna_s1807 | GAGACGAT | ACCGGTTA | 55687526 | 0.041917 | |
| 7 | rna_s1808 | CTTGTCGA | CGATGTTC | 75223845 | 0.056623 | |
| 7 | rna_s1809 | TTCCAAGG | CTACAAGG | 69123737 | 0.052031 | |
| 7 | rna_s1810 | CGCATGAT | AAGCCTGA | 58435473 | 0.043986 | |
| 7 | rna_s1811 | ACGGAACA | ACGAGAAC | 45992450 | 0.034620 | |
| 7 | CTGATCGT | CTGTACCA | 32196 | 0.022442 | 0.000024 | |
| 7 | CTGATCGT | GAACGGTT | 30123 | 0.020997 | 0.000023 | |
| 7 | CTGATCGT | ACCGGTTA | 24535 | 0.017102 | 0.000018 | |
| 7 | CTGATCGT | CGATGTTC | 39884 | 0.027800 | 0.000030 | |
| 7 | CTGATCGT | CTACAAGG | 28926 | 0.020162 | 0.000022 | |
| 7 | CTGATCGT | AAGCCTGA | 36125 | 0.025180 | 0.000027 | |
| 7 | CTGATCGT | ACGAGAAC | 24290 | 0.016931 | 0.000018 | |
| 7 | ACTCTCGA | GCGCATAT | 18522 | 0.012910 | 0.000014 | |
| 7 | ACTCTCGA | GAACGGTT | 20959 | 0.014609 | 0.000016 | |
| 7 | ACTCTCGA | ACCGGTTA | 18155 | 0.012655 | 0.000014 | |
| 7 | ACTCTCGA | CGATGTTC | 37909 | 0.026424 | 0.000029 | |
| 7 | ACTCTCGA | CTACAAGG | 28441 | 0.019824 | 0.000021 | |
| 7 | ACTCTCGA | AAGCCTGA | 18578 | 0.012949 | 0.000014 | |
| 7 | ACTCTCGA | ACGAGAAC | 18596 | 0.012962 | 0.000014 | |
| 7 | TGAGCTAG | GCGCATAT | 25527 | 0.017793 | 0.000019 | |
| 7 | TGAGCTAG | CTGTACCA | 29139 | 0.020311 | 0.000022 | |
| 7 | TGAGCTAG | ACCGGTTA | 26890 | 0.018743 | 0.000020 | |
| 7 | TGAGCTAG | CGATGTTC | 31896 | 0.022233 | 0.000024 | |
| 7 | TGAGCTAG | CTACAAGG | 31130 | 0.021699 | 0.000023 | |
| 7 | TGAGCTAG | AAGCCTGA | 25238 | 0.017592 | 0.000019 | |
| 7 | TGAGCTAG | ACGAGAAC | 21230 | 0.014798 | 0.000016 | |
| 7 | GAGACGAT | GCGCATAT | 18782 | 0.013092 | 0.000014 | |
| 7 | GAGACGAT | CTGTACCA | 26013 | 0.018132 | 0.000020 | |
| 7 | GAGACGAT | GAACGGTT | 22830 | 0.015913 | 0.000017 | |
| 7 | GAGACGAT | CGATGTTC | 26907 | 0.018755 | 0.000020 | |
| 7 | GAGACGAT | CTACAAGG | 22527 | 0.015702 | 0.000017 | |
| 7 | GAGACGAT | AAGCCTGA | 22850 | 0.015927 | 0.000017 | |
| 7 | GAGACGAT | ACGAGAAC | 21232 | 0.014799 | 0.000016 | |
| 7 | CTTGTCGA | GCGCATAT | 28002 | 0.019518 | 0.000021 | |
| 7 | CTTGTCGA | CTGTACCA | 60734 | 0.042334 | 0.000046 | |
| 7 | CTTGTCGA | GAACGGTT | 27799 | 0.019377 | 0.000021 | |
| 7 | CTTGTCGA | ACCGGTTA | 23515 | 0.016391 | 0.000018 | |
| 7 | CTTGTCGA | CTACAAGG | 30773 | 0.021450 | 0.000023 | |
| 7 | CTTGTCGA | AAGCCTGA | 28455 | 0.019834 | 0.000021 | |
| 7 | CTTGTCGA | ACGAGAAC | 20884 | 0.014557 | 0.000016 | |
| 7 | TTCCAAGG | GCGCATAT | 20682 | 0.014416 | 0.000016 | |
| 7 | TTCCAAGG | CTGTACCA | 32869 | 0.022911 | 0.000025 | |
| 7 | TTCCAAGG | GAACGGTT | 26009 | 0.018129 | 0.000020 | |
| 7 | TTCCAAGG | ACCGGTTA | 22628 | 0.015772 | 0.000017 | |
| 7 | TTCCAAGG | CGATGTTC | 29907 | 0.020846 | 0.000023 | |
| 7 | TTCCAAGG | AAGCCTGA | 21888 | 0.015257 | 0.000016 | |
| 7 | TTCCAAGG | ACGAGAAC | 19479 | 0.013577 | 0.000015 | |
| 7 | CGCATGAT | GCGCATAT | 27205 | 0.018963 | 0.000020 | |
| 7 | CGCATGAT | CTGTACCA | 26935 | 0.018775 | 0.000020 | |
| 7 | CGCATGAT | GAACGGTT | 33823 | 0.023576 | 0.000025 | |
| 7 | CGCATGAT | ACCGGTTA | 32310 | 0.022521 | 0.000024 | |
| 7 | CGCATGAT | CGATGTTC | 29850 | 0.020806 | 0.000022 | |
| 7 | CGCATGAT | CTACAAGG | 24798 | 0.017285 | 0.000019 | |
| 7 | CGCATGAT | ACGAGAAC | 18725 | 0.013052 | 0.000014 | |
| 7 | ACGGAACA | GCGCATAT | 14215 | 0.009908 | 0.000011 | |
| 7 | ACGGAACA | CTGTACCA | 21001 | 0.014638 | 0.000016 | |
| 7 | ACGGAACA | GAACGGTT | 14598 | 0.010175 | 0.000011 | |
| 7 | ACGGAACA | ACCGGTTA | 16558 | 0.011541 | 0.000012 | |
| 7 | ACGGAACA | CGATGTTC | 19349 | 0.013487 | 0.000015 | |
| 7 | ACGGAACA | CTACAAGG | 17108 | 0.011925 | 0.000013 | |
| 7 | ACGGAACA | AAGCCTGA | 15125 | 0.010543 | 0.000011 |
65 rows