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Filename
Index_Hopping_Counts.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0032/A2327GFLT3/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L002/Reports/Index_Hopping_Counts.csv
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2.9 KB
Workflow Run
cgp_rna_exp0032_73d51683
Published
Jun 07, 2026 11:11 PM

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Lane SampleID index index2 # Reads % of Hopped Reads % of All Reads
2 rna_s1804 CTGATCGT GCGCATAT 63792648 0.046295
2 rna_s1805 ACTCTCGA CTGTACCA 73151470 0.053087
2 rna_s1806 TGAGCTAG GAACGGTT 74154780 0.053815
2 rna_s1807 GAGACGAT ACCGGTTA 58908781 0.042751
2 rna_s1808 CTTGTCGA CGATGTTC 79058507 0.057373
2 rna_s1809 TTCCAAGG CTACAAGG 73789618 0.053550
2 rna_s1810 CGCATGAT AAGCCTGA 62333330 0.045236
2 rna_s1811 ACGGAACA ACGAGAAC 49846517 0.036174
2 CTGATCGT CTGTACCA 31728 0.021629 0.000023
2 CTGATCGT GAACGGTT 29804 0.020317 0.000022
2 CTGATCGT ACCGGTTA 24937 0.016999 0.000018
2 CTGATCGT CGATGTTC 39954 0.027236 0.000029
2 CTGATCGT CTACAAGG 29748 0.020279 0.000022
2 CTGATCGT AAGCCTGA 36893 0.025150 0.000027
2 CTGATCGT ACGAGAAC 24614 0.016779 0.000018
2 ACTCTCGA GCGCATAT 19696 0.013427 0.000014
2 ACTCTCGA GAACGGTT 22176 0.015117 0.000016
2 ACTCTCGA ACCGGTTA 18833 0.012838 0.000014
2 ACTCTCGA CGATGTTC 38640 0.026341 0.000028
2 ACTCTCGA CTACAAGG 29569 0.020157 0.000021
2 ACTCTCGA AAGCCTGA 19093 0.013016 0.000014
2 ACTCTCGA ACGAGAAC 19723 0.013445 0.000014
2 TGAGCTAG GCGCATAT 25799 0.017587 0.000019
2 TGAGCTAG CTGTACCA 29834 0.020338 0.000022
2 TGAGCTAG ACCGGTTA 27474 0.018729 0.000020
2 TGAGCTAG CGATGTTC 32550 0.022189 0.000024
2 TGAGCTAG CTACAAGG 31978 0.021799 0.000023
2 TGAGCTAG AAGCCTGA 25666 0.017496 0.000019
2 TGAGCTAG ACGAGAAC 22183 0.015122 0.000016
2 GAGACGAT GCGCATAT 19008 0.012958 0.000014
2 GAGACGAT CTGTACCA 26572 0.018114 0.000019
2 GAGACGAT GAACGGTT 23219 0.015828 0.000017
2 GAGACGAT CGATGTTC 27199 0.018541 0.000020
2 GAGACGAT CTACAAGG 23530 0.016040 0.000017
2 GAGACGAT AAGCCTGA 23008 0.015684 0.000017
2 GAGACGAT ACGAGAAC 21984 0.014986 0.000016
2 CTTGTCGA GCGCATAT 28607 0.019501 0.000021
2 CTTGTCGA CTGTACCA 59781 0.040752 0.000043
2 CTTGTCGA GAACGGTT 27953 0.019055 0.000020
2 CTTGTCGA ACCGGTTA 24049 0.016394 0.000017
2 CTTGTCGA CTACAAGG 31472 0.021454 0.000023
2 CTTGTCGA AAGCCTGA 29078 0.019822 0.000021
2 CTTGTCGA ACGAGAAC 21349 0.014553 0.000015
2 TTCCAAGG GCGCATAT 21333 0.014543 0.000015
2 TTCCAAGG CTGTACCA 33872 0.023090 0.000025
2 TTCCAAGG GAACGGTT 26950 0.018372 0.000020
2 TTCCAAGG ACCGGTTA 22804 0.015545 0.000017
2 TTCCAAGG CGATGTTC 30196 0.020584 0.000022
2 TTCCAAGG AAGCCTGA 22375 0.015253 0.000016
2 TTCCAAGG ACGAGAAC 20482 0.013962 0.000015
2 CGCATGAT GCGCATAT 27625 0.018832 0.000020
2 CGCATGAT CTGTACCA 27431 0.018700 0.000020
2 CGCATGAT GAACGGTT 34246 0.023345 0.000025
2 CGCATGAT ACCGGTTA 32440 0.022114 0.000024
2 CGCATGAT CGATGTTC 31110 0.021207 0.000023
2 CGCATGAT CTACAAGG 25804 0.017590 0.000019
2 CGCATGAT ACGAGAAC 19567 0.013339 0.000014
2 ACGGAACA GCGCATAT 14715 0.010031 0.000011
2 ACGGAACA CTGTACCA 21763 0.014836 0.000016
2 ACGGAACA GAACGGTT 15415 0.010508 0.000011
2 ACGGAACA ACCGGTTA 17212 0.011733 0.000012
2 ACGGAACA CGATGTTC 20371 0.013887 0.000015
2 ACGGAACA CTACAAGG 17687 0.012057 0.000013
2 ACGGAACA AAGCCTGA 15835 0.010795 0.000011
65 rows