File Info
- Filename
- Quality_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0032/A2327GFLT3/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L008/Reports/Quality_Metrics.csv
- Size
- 1.5 KB
- Workflow Run
- cgp_rna_exp0032_73d51683
- Published
- Jun 07, 2026 11:11 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 8 | rna_s1804 | CTGATCGT | GCGCATAT | 1 | 9224919482 | 8488284258 | 353777235318 | 38.35 | 0.92 |
| 8 | rna_s1804 | CTGATCGT | GCGCATAT | 2 | 9224919482 | 8312857345 | 349738290925 | 37.91 | 0.90 |
| 8 | rna_s1805 | ACTCTCGA | CTGTACCA | 1 | 10400041497 | 9528348559 | 397883985016 | 38.26 | 0.92 |
| 8 | rna_s1805 | ACTCTCGA | CTGTACCA | 2 | 10400041497 | 9354495152 | 393898708526 | 37.87 | 0.90 |
| 8 | rna_s1806 | TGAGCTAG | GAACGGTT | 1 | 10645680294 | 9802615144 | 408445275211 | 38.37 | 0.92 |
| 8 | rna_s1806 | TGAGCTAG | GAACGGTT | 2 | 10645680294 | 9665270325 | 405296564811 | 38.07 | 0.91 |
| 8 | rna_s1807 | GAGACGAT | ACCGGTTA | 1 | 8447018067 | 7781810085 | 324160020681 | 38.38 | 0.92 |
| 8 | rna_s1807 | GAGACGAT | ACCGGTTA | 2 | 8447018067 | 7619362129 | 320474355838 | 37.94 | 0.90 |
| 8 | rna_s1808 | CTTGTCGA | CGATGTTC | 1 | 11414697926 | 10458776148 | 436778403807 | 38.26 | 0.92 |
| 8 | rna_s1808 | CTTGTCGA | CGATGTTC | 2 | 11414697926 | 10296552035 | 433067235629 | 37.94 | 0.90 |
| 8 | rna_s1809 | TTCCAAGG | CTACAAGG | 1 | 10516627691 | 9620942834 | 402085661990 | 38.23 | 0.91 |
| 8 | rna_s1809 | TTCCAAGG | CTACAAGG | 2 | 10516627691 | 9508397676 | 399494635092 | 37.99 | 0.90 |
| 8 | rna_s1810 | CGCATGAT | AAGCCTGA | 1 | 8921059615 | 8219803567 | 342331459084 | 38.37 | 0.92 |
| 8 | rna_s1810 | CGCATGAT | AAGCCTGA | 2 | 8921059615 | 8080328138 | 339082893707 | 38.01 | 0.91 |
| 8 | rna_s1811 | ACGGAACA | ACGAGAAC | 1 | 6999005379 | 6446473146 | 268576598577 | 38.37 | 0.92 |
| 8 | rna_s1811 | ACGGAACA | ACGAGAAC | 2 | 6999005379 | 6331976602 | 265965118303 | 38.00 | 0.90 |
| 8 | Undetermined | 1 | 126054218952 | 108699125641 | 4656943016716 | 36.94 | 0.86 | ||
| 8 | Undetermined | 2 | 126054218952 | 105776519864 | 4584539553455 | 36.37 | 0.84 |
19 rows