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Filename
Index_Hopping_Counts.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0032/A2327GFLT3/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L005/Reports/Index_Hopping_Counts.csv
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2.9 KB
Workflow Run
cgp_rna_exp0032_73d51683
Published
Jun 07, 2026 11:11 PM

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Lane SampleID index index2 # Reads % of Hopped Reads % of All Reads
5 rna_s1804 CTGATCGT GCGCATAT 63544386 0.046293
5 rna_s1805 ACTCTCGA CTGTACCA 73674524 0.053673
5 rna_s1806 TGAGCTAG GAACGGTT 74447793 0.054236
5 rna_s1807 GAGACGAT ACCGGTTA 59001790 0.042984
5 rna_s1808 CTTGTCGA CGATGTTC 79667416 0.058039
5 rna_s1809 TTCCAAGG CTACAAGG 74336703 0.054155
5 rna_s1810 CGCATGAT AAGCCTGA 62094185 0.045237
5 rna_s1811 ACGGAACA ACGAGAAC 50201740 0.036573
5 CTGATCGT CTGTACCA 32167 0.021578 0.000023
5 CTGATCGT GAACGGTT 30083 0.020180 0.000022
5 CTGATCGT ACCGGTTA 25506 0.017110 0.000019
5 CTGATCGT CGATGTTC 40617 0.027246 0.000030
5 CTGATCGT CTACAAGG 29599 0.019855 0.000022
5 CTGATCGT AAGCCTGA 36737 0.024644 0.000027
5 CTGATCGT ACGAGAAC 24625 0.016519 0.000018
5 ACTCTCGA GCGCATAT 19720 0.013228 0.000014
5 ACTCTCGA GAACGGTT 22992 0.015423 0.000017
5 ACTCTCGA ACCGGTTA 19464 0.013057 0.000014
5 ACTCTCGA CGATGTTC 39047 0.026193 0.000028
5 ACTCTCGA CTACAAGG 29880 0.020044 0.000022
5 ACTCTCGA AAGCCTGA 19534 0.013104 0.000014
5 ACTCTCGA ACGAGAAC 20262 0.013592 0.000015
5 TGAGCTAG GCGCATAT 26604 0.017846 0.000019
5 TGAGCTAG CTGTACCA 30598 0.020525 0.000022
5 TGAGCTAG ACCGGTTA 27669 0.018561 0.000020
5 TGAGCTAG CGATGTTC 32733 0.021958 0.000024
5 TGAGCTAG CTACAAGG 32697 0.021933 0.000024
5 TGAGCTAG AAGCCTGA 26056 0.017479 0.000019
5 TGAGCTAG ACGAGAAC 22453 0.015062 0.000016
5 GAGACGAT GCGCATAT 19586 0.013138 0.000014
5 GAGACGAT CTGTACCA 26901 0.018045 0.000020
5 GAGACGAT GAACGGTT 23927 0.016050 0.000017
5 GAGACGAT CGATGTTC 27682 0.018569 0.000020
5 GAGACGAT CTACAAGG 23757 0.015936 0.000017
5 GAGACGAT AAGCCTGA 23424 0.015713 0.000017
5 GAGACGAT ACGAGAAC 22388 0.015018 0.000016
5 CTTGTCGA GCGCATAT 29290 0.019648 0.000021
5 CTTGTCGA CTGTACCA 60195 0.040379 0.000044
5 CTTGTCGA GAACGGTT 28695 0.019249 0.000021
5 CTTGTCGA ACCGGTTA 24664 0.016545 0.000018
5 CTTGTCGA CTACAAGG 32029 0.021485 0.000023
5 CTTGTCGA AAGCCTGA 29874 0.020040 0.000022
5 CTTGTCGA ACGAGAAC 22022 0.014773 0.000016
5 TTCCAAGG GCGCATAT 22089 0.014818 0.000016
5 TTCCAAGG CTGTACCA 34701 0.023278 0.000025
5 TTCCAAGG GAACGGTT 27022 0.018127 0.000020
5 TTCCAAGG ACCGGTTA 23755 0.015935 0.000017
5 TTCCAAGG CGATGTTC 30963 0.020770 0.000023
5 TTCCAAGG AAGCCTGA 23245 0.015593 0.000017
5 TTCCAAGG ACGAGAAC 20552 0.013786 0.000015
5 CGCATGAT GCGCATAT 27796 0.018646 0.000020
5 CGCATGAT CTGTACCA 27848 0.018681 0.000020
5 CGCATGAT GAACGGTT 33906 0.022745 0.000025
5 CGCATGAT ACCGGTTA 32657 0.021907 0.000024
5 CGCATGAT CGATGTTC 31010 0.020802 0.000023
5 CGCATGAT CTACAAGG 26033 0.017463 0.000019
5 CGCATGAT ACGAGAAC 19800 0.013282 0.000014
5 ACGGAACA GCGCATAT 15181 0.010184 0.000011
5 ACGGAACA CTGTACCA 22050 0.014791 0.000016
5 ACGGAACA GAACGGTT 15664 0.010508 0.000011
5 ACGGAACA ACCGGTTA 17732 0.011895 0.000013
5 ACGGAACA CGATGTTC 20517 0.013763 0.000015
5 ACGGAACA CTACAAGG 18420 0.012356 0.000013
5 ACGGAACA AAGCCTGA 16316 0.010945 0.000012
65 rows