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Filename
Index_Hopping_Counts.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0032/A2327GFLT3/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L008/Reports/Index_Hopping_Counts.csv
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2.9 KB
Workflow Run
cgp_rna_exp0032_73d51683
Published
Jun 07, 2026 11:11 PM

Content

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Lane SampleID index index2 # Reads % of Hopped Reads % of All Reads
8 rna_s1804 CTGATCGT GCGCATAT 61092182 0.045527
8 rna_s1805 ACTCTCGA CTGTACCA 68874447 0.051327
8 rna_s1806 TGAGCTAG GAACGGTT 70501194 0.052539
8 rna_s1807 GAGACGAT ACCGGTTA 55940517 0.041688
8 rna_s1808 CTTGTCGA CGATGTTC 75594026 0.056335
8 rna_s1809 TTCCAAGG CTACAAGG 69646541 0.051902
8 rna_s1810 CGCATGAT AAGCCTGA 59079865 0.044028
8 rna_s1811 ACGGAACA ACGAGAAC 46351029 0.034542
8 CTGATCGT CTGTACCA 31338 0.021984 0.000023
8 CTGATCGT GAACGGTT 29807 0.020910 0.000022
8 CTGATCGT ACCGGTTA 24266 0.017023 0.000018
8 CTGATCGT CGATGTTC 39317 0.027581 0.000029
8 CTGATCGT CTACAAGG 29228 0.020504 0.000022
8 CTGATCGT AAGCCTGA 36102 0.025326 0.000027
8 CTGATCGT ACGAGAAC 23904 0.016769 0.000018
8 ACTCTCGA GCGCATAT 18870 0.013237 0.000014
8 ACTCTCGA GAACGGTT 21037 0.014758 0.000016
8 ACTCTCGA ACCGGTTA 18057 0.012667 0.000013
8 ACTCTCGA CGATGTTC 38109 0.026734 0.000028
8 ACTCTCGA CTACAAGG 28086 0.019702 0.000021
8 ACTCTCGA AAGCCTGA 18374 0.012889 0.000014
8 ACTCTCGA ACGAGAAC 18529 0.012998 0.000014
8 TGAGCTAG GCGCATAT 25504 0.017891 0.000019
8 TGAGCTAG CTGTACCA 29477 0.020678 0.000022
8 TGAGCTAG ACCGGTTA 26507 0.018595 0.000020
8 TGAGCTAG CGATGTTC 31886 0.022368 0.000024
8 TGAGCTAG CTACAAGG 31090 0.021810 0.000023
8 TGAGCTAG AAGCCTGA 24939 0.017495 0.000019
8 TGAGCTAG ACGAGAAC 21399 0.015012 0.000016
8 GAGACGAT GCGCATAT 18526 0.012996 0.000014
8 GAGACGAT CTGTACCA 25803 0.018101 0.000019
8 GAGACGAT GAACGGTT 22383 0.015702 0.000017
8 GAGACGAT CGATGTTC 26423 0.018536 0.000020
8 GAGACGAT CTACAAGG 22376 0.015697 0.000017
8 GAGACGAT AAGCCTGA 22831 0.016016 0.000017
8 GAGACGAT ACGAGAAC 21406 0.015016 0.000016
8 CTTGTCGA GCGCATAT 27771 0.019481 0.000021
8 CTTGTCGA CTGTACCA 58773 0.041230 0.000044
8 CTTGTCGA GAACGGTT 27372 0.019202 0.000020
8 CTTGTCGA ACCGGTTA 23488 0.016477 0.000018
8 CTTGTCGA CTACAAGG 30749 0.021571 0.000023
8 CTTGTCGA AAGCCTGA 28428 0.019942 0.000021
8 CTTGTCGA ACGAGAAC 20484 0.014370 0.000015
8 TTCCAAGG GCGCATAT 20763 0.014565 0.000015
8 TTCCAAGG CTGTACCA 32735 0.022964 0.000024
8 TTCCAAGG GAACGGTT 25927 0.018188 0.000019
8 TTCCAAGG ACCGGTTA 22343 0.015674 0.000017
8 TTCCAAGG CGATGTTC 29653 0.020802 0.000022
8 TTCCAAGG AAGCCTGA 21812 0.015301 0.000016
8 TTCCAAGG ACGAGAAC 19418 0.013622 0.000014
8 CGCATGAT GCGCATAT 26916 0.018882 0.000020
8 CGCATGAT CTGTACCA 26740 0.018758 0.000020
8 CGCATGAT GAACGGTT 33629 0.023591 0.000025
8 CGCATGAT ACCGGTTA 31869 0.022356 0.000024
8 CGCATGAT CGATGTTC 30264 0.021230 0.000023
8 CGCATGAT CTACAAGG 24367 0.017094 0.000018
8 CGCATGAT ACGAGAAC 18613 0.013057 0.000014
8 ACGGAACA GCGCATAT 14229 0.009982 0.000011
8 ACGGAACA CTGTACCA 20901 0.014662 0.000016
8 ACGGAACA GAACGGTT 14399 0.010101 0.000011
8 ACGGAACA ACCGGTTA 16403 0.011507 0.000012
8 ACGGAACA CGATGTTC 19430 0.013630 0.000014
8 ACGGAACA CTACAAGG 17056 0.011965 0.000013
8 ACGGAACA AAGCCTGA 15401 0.010804 0.000011
65 rows