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Filename
Index_Hopping_Counts.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0032/A2327GFLT3/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L006/Reports/Index_Hopping_Counts.csv
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2.9 KB
Workflow Run
cgp_rna_exp0032_73d51683
Published
Jun 07, 2026 11:11 PM

Content

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Lane SampleID index index2 # Reads % of Hopped Reads % of All Reads
6 rna_s1804 CTGATCGT GCGCATAT 60127607 0.045584
6 rna_s1805 ACTCTCGA CTGTACCA 68169930 0.051681
6 rna_s1806 TGAGCTAG GAACGGTT 69652145 0.052804
6 rna_s1807 GAGACGAT ACCGGTTA 55476192 0.042057
6 rna_s1808 CTTGTCGA CGATGTTC 74880227 0.056768
6 rna_s1809 TTCCAAGG CTACAAGG 68516570 0.051943
6 rna_s1810 CGCATGAT AAGCCTGA 58057660 0.044014
6 rna_s1811 ACGGAACA ACGAGAAC 45619247 0.034585
6 CTGATCGT CTGTACCA 30839 0.022122 0.000023
6 CTGATCGT GAACGGTT 28967 0.020779 0.000022
6 CTGATCGT ACCGGTTA 23989 0.017208 0.000018
6 CTGATCGT CGATGTTC 38746 0.027794 0.000029
6 CTGATCGT CTACAAGG 28273 0.020281 0.000021
6 CTGATCGT AAGCCTGA 34926 0.025053 0.000026
6 CTGATCGT ACGAGAAC 23239 0.016670 0.000018
6 ACTCTCGA GCGCATAT 18094 0.012979 0.000014
6 ACTCTCGA GAACGGTT 20584 0.014766 0.000016
6 ACTCTCGA ACCGGTTA 17528 0.012573 0.000013
6 ACTCTCGA CGATGTTC 37290 0.026749 0.000028
6 ACTCTCGA CTACAAGG 27409 0.019661 0.000021
6 ACTCTCGA AAGCCTGA 17693 0.012692 0.000013
6 ACTCTCGA ACGAGAAC 18152 0.013021 0.000014
6 TGAGCTAG GCGCATAT 24926 0.017880 0.000019
6 TGAGCTAG CTGTACCA 28519 0.020458 0.000022
6 TGAGCTAG ACCGGTTA 25629 0.018384 0.000019
6 TGAGCTAG CGATGTTC 31172 0.022361 0.000024
6 TGAGCTAG CTACAAGG 30464 0.021853 0.000023
6 TGAGCTAG AAGCCTGA 24245 0.017392 0.000018
6 TGAGCTAG ACGAGAAC 20696 0.014846 0.000016
6 GAGACGAT GCGCATAT 18010 0.012919 0.000014
6 GAGACGAT CTGTACCA 25321 0.018164 0.000019
6 GAGACGAT GAACGGTT 22513 0.016149 0.000017
6 GAGACGAT CGATGTTC 25931 0.018601 0.000020
6 GAGACGAT CTACAAGG 21898 0.015708 0.000017
6 GAGACGAT AAGCCTGA 22246 0.015958 0.000017
6 GAGACGAT ACGAGAAC 20954 0.015031 0.000016
6 CTTGTCGA GCGCATAT 27056 0.019408 0.000021
6 CTTGTCGA CTGTACCA 60712 0.043551 0.000046
6 CTTGTCGA GAACGGTT 26775 0.019207 0.000020
6 CTTGTCGA ACCGGTTA 22947 0.016461 0.000017
6 CTTGTCGA CTACAAGG 29663 0.021278 0.000022
6 CTTGTCGA AAGCCTGA 27855 0.019981 0.000021
6 CTTGTCGA ACGAGAAC 20126 0.014437 0.000015
6 TTCCAAGG GCGCATAT 20121 0.014433 0.000015
6 TTCCAAGG CTGTACCA 32192 0.023092 0.000024
6 TTCCAAGG GAACGGTT 25151 0.018042 0.000019
6 TTCCAAGG ACCGGTTA 21698 0.015565 0.000016
6 TTCCAAGG CGATGTTC 28954 0.020770 0.000022
6 TTCCAAGG AAGCCTGA 21324 0.015296 0.000016
6 TTCCAAGG ACGAGAAC 19058 0.013671 0.000014
6 CGCATGAT GCGCATAT 26325 0.018884 0.000020
6 CGCATGAT CTGTACCA 26017 0.018663 0.000020
6 CGCATGAT GAACGGTT 33011 0.023680 0.000025
6 CGCATGAT ACCGGTTA 31180 0.022366 0.000024
6 CGCATGAT CGATGTTC 29299 0.021017 0.000022
6 CGCATGAT CTACAAGG 23764 0.017047 0.000018
6 CGCATGAT ACGAGAAC 18051 0.012949 0.000014
6 ACGGAACA GCGCATAT 13779 0.009884 0.000010
6 ACGGAACA CTGTACCA 20090 0.014411 0.000015
6 ACGGAACA GAACGGTT 14161 0.010158 0.000011
6 ACGGAACA ACCGGTTA 16165 0.011596 0.000012
6 ACGGAACA CGATGTTC 19143 0.013732 0.000015
6 ACGGAACA CTACAAGG 16432 0.011787 0.000012
6 ACGGAACA AAGCCTGA 14757 0.010586 0.000011
65 rows