File Info
- Filename
- Quality_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0032/A2327GFLT3/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L002/Reports/Quality_Metrics.csv
- Size
- 1.5 KB
- Workflow Run
- cgp_rna_exp0032_73d51683
- Published
- Jun 07, 2026 11:11 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 2 | rna_s1804 | CTGATCGT | GCGCATAT | 1 | 9632689848 | 8941534464 | 371015844960 | 38.52 | 0.93 |
| 2 | rna_s1804 | CTGATCGT | GCGCATAT | 2 | 9632689848 | 8739751544 | 366448810502 | 38.04 | 0.91 |
| 2 | rna_s1805 | ACTCTCGA | CTGTACCA | 1 | 11045871970 | 10213140095 | 424507897997 | 38.43 | 0.92 |
| 2 | rna_s1805 | ACTCTCGA | CTGTACCA | 2 | 11045871970 | 10003028345 | 419781813500 | 38.00 | 0.91 |
| 2 | rna_s1806 | TGAGCTAG | GAACGGTT | 1 | 11197371780 | 10400770661 | 431456600123 | 38.53 | 0.93 |
| 2 | rna_s1806 | TGAGCTAG | GAACGGTT | 2 | 11197371780 | 10230031094 | 427625353472 | 38.19 | 0.91 |
| 2 | rna_s1807 | GAGACGAT | ACCGGTTA | 1 | 8895225931 | 8263240066 | 342759298486 | 38.53 | 0.93 |
| 2 | rna_s1807 | GAGACGAT | ACCGGTTA | 2 | 8895225931 | 8073502303 | 338518189156 | 38.06 | 0.91 |
| 2 | rna_s1808 | CTTGTCGA | CGATGTTC | 1 | 11937834557 | 11038589448 | 458859084075 | 38.44 | 0.92 |
| 2 | rna_s1808 | CTTGTCGA | CGATGTTC | 2 | 11937834557 | 10841239915 | 454438446007 | 38.07 | 0.91 |
| 2 | rna_s1809 | TTCCAAGG | CTACAAGG | 1 | 11142232318 | 10287738163 | 427949887612 | 38.41 | 0.92 |
| 2 | rna_s1809 | TTCCAAGG | CTACAAGG | 2 | 11142232318 | 10138842883 | 424602949696 | 38.11 | 0.91 |
| 2 | rna_s1810 | CGCATGAT | AAGCCTGA | 1 | 9412332830 | 8743460188 | 362628555382 | 38.53 | 0.93 |
| 2 | rna_s1810 | CGCATGAT | AAGCCTGA | 2 | 9412332830 | 8576026164 | 358814310756 | 38.12 | 0.91 |
| 2 | rna_s1811 | ACGGAACA | ACGAGAAC | 1 | 7526824067 | 6994120641 | 290081044452 | 38.54 | 0.93 |
| 2 | rna_s1811 | ACGGAACA | ACGAGAAC | 2 | 7526824067 | 6854875217 | 286965358721 | 38.13 | 0.91 |
| 2 | Undetermined | 1 | 127282081039 | 110937130282 | 4727363668753 | 37.14 | 0.87 | ||
| 2 | Undetermined | 2 | 127282081039 | 107900231007 | 4653687964377 | 36.56 | 0.85 |
19 rows