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Filename
Index_Hopping_Counts.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0032/A2327GFLT3/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L001/Reports/Index_Hopping_Counts.csv
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2.9 KB
Workflow Run
cgp_rna_exp0032_73d51683
Published
Jun 07, 2026 11:12 PM

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Lane SampleID index index2 # Reads % of Hopped Reads % of All Reads
1 rna_s1804 CTGATCGT GCGCATAT 63101166 0.046194
1 rna_s1805 ACTCTCGA CTGTACCA 73124030 0.053531
1 rna_s1806 TGAGCTAG GAACGGTT 74284464 0.054380
1 rna_s1807 GAGACGAT ACCGGTTA 58710578 0.042979
1 rna_s1808 CTTGTCGA CGATGTTC 78423837 0.057411
1 rna_s1809 TTCCAAGG CTACAAGG 74116164 0.054257
1 rna_s1810 CGCATGAT AAGCCTGA 62005379 0.045391
1 rna_s1811 ACGGAACA ACGAGAAC 50070990 0.036655
1 CTGATCGT CTGTACCA 31442 0.021801 0.000023
1 CTGATCGT GAACGGTT 29028 0.020127 0.000021
1 CTGATCGT ACCGGTTA 24551 0.017023 0.000018
1 CTGATCGT CGATGTTC 38334 0.026580 0.000028
1 CTGATCGT CTACAAGG 29202 0.020248 0.000021
1 CTGATCGT AAGCCTGA 35759 0.024794 0.000026
1 CTGATCGT ACGAGAAC 23889 0.016564 0.000017
1 ACTCTCGA GCGCATAT 18974 0.013156 0.000014
1 ACTCTCGA GAACGGTT 21851 0.015151 0.000016
1 ACTCTCGA ACCGGTTA 18853 0.013072 0.000014
1 ACTCTCGA CGATGTTC 37490 0.025994 0.000027
1 ACTCTCGA CTACAAGG 28921 0.020053 0.000021
1 ACTCTCGA AAGCCTGA 18812 0.013044 0.000014
1 ACTCTCGA ACGAGAAC 19637 0.013616 0.000014
1 TGAGCTAG GCGCATAT 25152 0.017440 0.000018
1 TGAGCTAG CTGTACCA 29946 0.020764 0.000022
1 TGAGCTAG ACCGGTTA 26885 0.018641 0.000020
1 TGAGCTAG CGATGTTC 31385 0.021761 0.000023
1 TGAGCTAG CTACAAGG 32010 0.022195 0.000023
1 TGAGCTAG AAGCCTGA 25117 0.017415 0.000018
1 TGAGCTAG ACGAGAAC 21817 0.015127 0.000016
1 GAGACGAT GCGCATAT 18599 0.012896 0.000014
1 GAGACGAT CTGTACCA 25965 0.018003 0.000019
1 GAGACGAT GAACGGTT 22720 0.015753 0.000017
1 GAGACGAT CGATGTTC 26180 0.018152 0.000019
1 GAGACGAT CTACAAGG 23028 0.015967 0.000017
1 GAGACGAT AAGCCTGA 22544 0.015631 0.000017
1 GAGACGAT ACGAGAAC 22033 0.015277 0.000016
1 CTTGTCGA GCGCATAT 27886 0.019335 0.000020
1 CTTGTCGA CTGTACCA 60107 0.041676 0.000044
1 CTTGTCGA GAACGGTT 27777 0.019260 0.000020
1 CTTGTCGA ACCGGTTA 23657 0.016403 0.000017
1 CTTGTCGA CTACAAGG 31305 0.021706 0.000023
1 CTTGTCGA AAGCCTGA 28486 0.019751 0.000021
1 CTTGTCGA ACGAGAAC 20829 0.014442 0.000015
1 TTCCAAGG GCGCATAT 20764 0.014397 0.000015
1 TTCCAAGG CTGTACCA 33646 0.023329 0.000025
1 TTCCAAGG GAACGGTT 26567 0.018421 0.000019
1 TTCCAAGG ACCGGTTA 22961 0.015920 0.000017
1 TTCCAAGG CGATGTTC 29664 0.020568 0.000022
1 TTCCAAGG AAGCCTGA 22124 0.015340 0.000016
1 TTCCAAGG ACGAGAAC 19639 0.013617 0.000014
1 CGCATGAT GCGCATAT 26848 0.018616 0.000020
1 CGCATGAT CTGTACCA 27400 0.018998 0.000020
1 CGCATGAT GAACGGTT 33945 0.023536 0.000025
1 CGCATGAT ACCGGTTA 32351 0.022431 0.000024
1 CGCATGAT CGATGTTC 30356 0.021048 0.000022
1 CGCATGAT CTACAAGG 25608 0.017756 0.000019
1 CGCATGAT ACGAGAAC 19367 0.013429 0.000014
1 ACGGAACA GCGCATAT 14475 0.010037 0.000011
1 ACGGAACA CTGTACCA 21665 0.015022 0.000016
1 ACGGAACA GAACGGTT 15101 0.010471 0.000011
1 ACGGAACA ACCGGTTA 17067 0.011834 0.000012
1 ACGGAACA CGATGTTC 19617 0.013602 0.000014
1 ACGGAACA CTACAAGG 17887 0.012402 0.000013
1 ACGGAACA AAGCCTGA 15006 0.010405 0.000011
65 rows