File Info
- Filename
- Quality_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0032/A2327GFLT3/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L004/Reports/Quality_Metrics.csv
- Size
- 1.5 KB
- Workflow Run
- cgp_rna_exp0032_73d51683
- Published
- Jun 07, 2026 11:12 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 4 | rna_s1804 | CTGATCGT | GCGCATAT | 1 | 9560786668 | 8878466768 | 368363679857 | 38.53 | 0.93 |
| 4 | rna_s1804 | CTGATCGT | GCGCATAT | 2 | 9560786668 | 8690497229 | 364080926552 | 38.08 | 0.91 |
| 4 | rna_s1805 | ACTCTCGA | CTGTACCA | 1 | 10905014791 | 10084131169 | 419128769233 | 38.43 | 0.92 |
| 4 | rna_s1805 | ACTCTCGA | CTGTACCA | 2 | 10905014791 | 9896278116 | 414888369633 | 38.05 | 0.91 |
| 4 | rna_s1806 | TGAGCTAG | GAACGGTT | 1 | 11243060907 | 10446897533 | 433327817663 | 38.54 | 0.93 |
| 4 | rna_s1806 | TGAGCTAG | GAACGGTT | 2 | 11243060907 | 10293828229 | 429852651676 | 38.23 | 0.92 |
| 4 | rna_s1807 | GAGACGAT | ACCGGTTA | 1 | 8746949518 | 8130774921 | 337187832318 | 38.55 | 0.93 |
| 4 | rna_s1807 | GAGACGAT | ACCGGTTA | 2 | 8746949518 | 7958451881 | 333319079570 | 38.11 | 0.91 |
| 4 | rna_s1808 | CTTGTCGA | CGATGTTC | 1 | 11752498667 | 10868743739 | 451781112788 | 38.44 | 0.92 |
| 4 | rna_s1808 | CTTGTCGA | CGATGTTC | 2 | 11752498667 | 10696788289 | 447913946917 | 38.11 | 0.91 |
| 4 | rna_s1809 | TTCCAAGG | CTACAAGG | 1 | 11183100015 | 10326515140 | 429569552068 | 38.41 | 0.92 |
| 4 | rna_s1809 | TTCCAAGG | CTACAAGG | 2 | 11183100015 | 10197676728 | 426636808770 | 38.15 | 0.91 |
| 4 | rna_s1810 | CGCATGAT | AAGCCTGA | 1 | 9454824079 | 8787657771 | 364396518621 | 38.54 | 0.93 |
| 4 | rna_s1810 | CGCATGAT | AAGCCTGA | 2 | 9454824079 | 8635875700 | 360902018194 | 38.17 | 0.91 |
| 4 | rna_s1811 | ACGGAACA | ACGAGAAC | 1 | 7449039588 | 6923430504 | 287126547051 | 38.55 | 0.93 |
| 4 | rna_s1811 | ACGGAACA | ACGAGAAC | 2 | 7449039588 | 6799716014 | 284348694164 | 38.17 | 0.91 |
| 4 | Undetermined | 1 | 126588478847 | 110134921827 | 4697344075818 | 37.11 | 0.87 | ||
| 4 | Undetermined | 2 | 126588478847 | 107555388914 | 4634126238065 | 36.61 | 0.85 |
19 rows