#!/bin/bash -euo pipefail
kallisto \
    index \
    -t 2 \
     \
    -i kallisto \
    Homo_sapiens.GRCh38.102.cdna.all.fa.gz

cat <<-END_VERSIONS > versions.yml
"NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX":
    kallisto: $(echo $(kallisto 2>&1) | sed 's/^kallisto //; s/Usage.*$//')
END_VERSIONS