2026-06-08T06:03:57Z thread 446 Sample sheet being processed by common lib? Yes
2026-06-08T06:03:57Z thread 446 SampleSheet Settings: 
2026-06-08T06:03:57Z thread 446   FastqCompressionFormat = gzip
2026-06-08T06:03:57Z thread 446   NoLaneSplitting = FALSE
2026-06-08T06:03:57Z thread 446   OverrideCycles = Y151;I8;I8;Y151
2026-06-08T06:03:57Z thread 446   SoftwareVersion = 4.3.6
2026-06-08T06:03:57Z thread 446 
2026-06-08T06:03:57Z thread 446 Index Read 2 (i5): The barcode and UMI outputs will be processed and output in Reverse Complement of Sample Sheet inputs. OverrideCycles bases for this read will be interpreted in reverse.
2026-06-08T06:03:58Z thread 446 shared-thread-linux-native-asio output is disabled
2026-06-08T06:03:58Z thread 446 bcl-convert Version 4.4.6
2026-06-08T06:03:58Z thread 446 Copyright (c) 2014-2025 Illumina, Inc.
2026-06-08T06:03:58Z thread 446 Command Line: --tiles s_2 --output-directory output --bcl-input-directory rundir --sample-sheet rundir/SampleSheet.csv 
2026-06-08T06:03:58Z thread 446 Conversion Begins.
2026-06-08T06:03:58Z thread 446 Input BCL Information:
2026-06-08T06:03:58Z thread 446     Read Structure: 2026-06-08T06:03:58Z thread 446 Y1512026-06-08T06:03:58Z thread 446 ;2026-06-08T06:03:58Z thread 446 I82026-06-08T06:03:58Z thread 446 ;2026-06-08T06:03:58Z thread 446 I82026-06-08T06:03:58Z thread 446 ;2026-06-08T06:03:58Z thread 446 Y1512026-06-08T06:03:58Z thread 446 
2026-06-08T06:03:58Z thread 446     RunInfo.xml file lists: 8 lanes, 3136 tiles
2026-06-08T06:03:58Z thread 446     BCL file format: cbcl
2026-06-08T06:03:58Z thread 446     Positions file format: slocs
2026-06-08T06:03:58Z thread 446     Filter file format: filter
2026-06-08T06:03:58Z thread 446 Conversion Information:
2026-06-08T06:03:58Z thread 446     Tile filtering: converting 392/3136 tiles
2026-06-08T06:03:58Z thread 446     Sample Count for Lane 1: 8
2026-06-08T06:03:58Z thread 446     Lane 1 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:03:58Z thread 446     Sample Count for Lane 2: 8
2026-06-08T06:03:58Z thread 446     Sample Count for Lane 3: 8
2026-06-08T06:03:58Z thread 446     Lane 3 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:03:58Z thread 446     Sample Count for Lane 4: 8
2026-06-08T06:03:58Z thread 446     Lane 4 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:03:58Z thread 446     Sample Count for Lane 5: 8
2026-06-08T06:03:58Z thread 446     Lane 5 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:03:58Z thread 446     Sample Count for Lane 6: 8
2026-06-08T06:03:58Z thread 446     Lane 6 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:03:58Z thread 446     Sample Count for Lane 7: 8
2026-06-08T06:03:58Z thread 446     Lane 7 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:03:58Z thread 446     Sample Count for Lane 8: 8
2026-06-08T06:03:58Z thread 446     Lane 8 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:03:58Z thread 446     Expected number of sample FASTQ files to be created: 16
2026-06-08T06:03:58Z thread 446 # CPU hw threads available: 64
2026-06-08T06:03:58Z thread 446 Parallel Tiles: 4. Threads Per Tile: 16
2026-06-08T06:03:58Z thread 446 SW compressors: 64
2026-06-08T06:03:58Z thread 446 SW decompressors: 32
2026-06-08T06:03:58Z thread 446 SW FASTQ compression level: 1
2026-06-08T06:07:48Z thread 446 Lane 2 Post-run Information:
2026-06-08T06:07:48Z thread 446     Total clusters: 1377963340
2026-06-08T06:07:48Z thread 446     Total Genomic Reads: 2755926680
2026-06-08T06:07:48Z thread 446     Total Genomic Input Gigabases 416.14
2026-06-08T06:07:48Z thread 446     Minimum reads for a sample: 99693034
2026-06-08T06:07:48Z thread 446     Maximum reads for a sample: 158117014
2026-06-08T06:07:48Z thread 446     Average reads per sample: 133758912.75
2026-06-08T06:07:48Z thread 446     Undetermined reads: 1685855378
2026-06-08T06:07:49Z thread 446 Conversion Complete.