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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0034/B2372Y3LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L001/Reports/Quality_Metrics.csv
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Workflow Run
cgp_rna_exp0034_73d51683
Published
Jun 07, 2026 11:30 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
1 dna_s731 GAGCAGTA TGAGCTGT 1 23221359085 22104998451 906081626712 39.02 0.95
1 dna_s731 GAGCAGTA TGAGCTGT 2 23221359085 21941444026 902590859167 38.87 0.94
1 dna_s732 AGTTCGTC ACTCGATC 1 12818195059 12020399725 495494729032 38.66 0.94
1 dna_s732 AGTTCGTC ACTCGATC 2 12818195059 11976171824 495212021168 38.63 0.93
1 dna_s733 TTGCGAAG AACACGCT 1 28057224685 26483093904 1089757128465 38.84 0.94
1 dna_s733 TTGCGAAG AACACGCT 2 28057224685 26343082736 1086881609972 38.74 0.94
1 dna_s734 ATCGCCAT TGCGTAAC 1 17205297870 16324972197 670187160348 38.95 0.95
1 dna_s734 ATCGCCAT TGCGTAAC 2 17205297870 16161031156 666406175920 38.73 0.94
1 dna_s735 TGGCATGT CGTCTTCA 1 18432220284 17463256209 717434345325 38.92 0.95
1 dna_s735 TGGCATGT CGTCTTCA 2 18432220284 17357966545 715068456322 38.79 0.94
1 dna_s736 CTGTTGAC ACCTCAGT 1 19589085191 18509777344 761141844232 38.86 0.94
1 dna_s736 CTGTTGAC ACCTCAGT 2 19589085191 18430198407 759556458357 38.77 0.94
1 dna_s737 CATACCAC AACAACCG 1 17073069737 16184400321 664419972504 38.92 0.95
1 dna_s737 CATACCAC AACAACCG 2 17073069737 16096589962 662765844301 38.82 0.94
1 dna_s738 GAAGTTGG CGAACAAC 1 26756790488 25510189458 1045336465131 39.07 0.95
1 dna_s738 GAAGTTGG CGAACAAC 2 26756790488 25300660388 1040710965518 38.90 0.95
1 dna_s739 ATGACGTC CTTCCTTC 1 281393030 258947207 10756361504 38.23 0.92
1 dna_s739 ATGACGTC CTTCCTTC 2 281393030 257987067 10760952723 38.24 0.92
1 dna_s740 TTGGACGT GAAGTGCT 1 20339841940 19362002758 793877098783 39.03 0.95
1 dna_s740 TTGGACGT GAAGTGCT 2 20339841940 19205607287 790338222779 38.86 0.94
1 dna_s741 AGTGGATC TCGATGAC 1 14007158489 13253613507 544543052805 38.88 0.95
1 dna_s741 AGTGGATC TCGATGAC 2 14007158489 13200450830 543567145148 38.81 0.94
1 dna_s742 GATAGGCT CAGTCACA 1 28327187166 26926280909 1104336777638 38.99 0.95
1 dna_s742 GATAGGCT CAGTCACA 2 28327187166 26796878525 1101671507573 38.89 0.95
1 dna_s743 TGGTAGCT AGGTGTTG 1 1558283307 1465989146 60358001243 38.73 0.94
1 dna_s743 TGGTAGCT AGGTGTTG 2 1558283307 1457282400 60225852654 38.65 0.94
1 dna_s744 CGCAATCT ACAGGCAT 1 17392582868 16513608144 677534266518 38.96 0.95
1 dna_s744 CGCAATCT ACAGGCAT 2 17392582868 16398676469 675119503208 38.82 0.94
1 dna_s745 GATGTGTG TAGCCATG 1 22009828856 20639852927 850972171421 38.66 0.94
1 dna_s745 GATGTGTG TAGCCATG 2 22009828856 20532187632 849287768658 38.59 0.93
1 dna_s746 GATTGCTC CACTTCAC 1 16851262062 15906453711 654168260124 38.82 0.94
1 dna_s746 GATTGCTC CACTTCAC 2 16851262062 15852038269 653378988781 38.77 0.94
1 dna_s747 CGCTCTAT TTGCAACG 1 21332373547 20414877564 835360600122 39.16 0.96
1 dna_s747 CGCTCTAT TTGCAACG 2 21332373547 20016927115 826330935592 38.74 0.94
1 dna_s748 TATCGGTC TACCGGAT 1 20510200140 19576714585 801793050532 39.09 0.95
1 dna_s748 TATCGGTC TACCGGAT 2 20510200140 19319674139 796049799713 38.81 0.94
1 dna_s749 AACGTCTG AATGACGC 1 30871047171 29469131554 1206688244230 39.09 0.95
1 dna_s749 AACGTCTG AATGACGC 2 30871047171 29033437533 1197315362352 38.78 0.94
1 dna_s750 ACGTTCAG AGTTGTGC 1 26762604441 25542448045 1046353869517 39.10 0.95
1 dna_s750 ACGTTCAG AGTTGTGC 2 26762604441 25109598809 1036859169677 38.74 0.94
1 dna_s751 CAGTCCAA CGGTAATC 1 20665624440 19703485252 807555927292 39.08 0.95
1 dna_s751 CAGTCCAA CGGTAATC 2 20665624440 19492747202 802650664985 38.84 0.94
1 dna_s752 TTGCAGAC ATCGTGGT 1 19105841854 18257562526 747446115943 39.12 0.96
1 dna_s752 TTGCAGAC ATCGTGGT 2 19105841854 17990295916 741168478030 38.79 0.94
1 dna_s753 CAATGTGG TCTTCGAC 1 31766164450 30326547420 1241843201166 39.09 0.95
1 dna_s753 CAATGTGG TCTTCGAC 2 31766164450 30073468602 1236274122687 38.92 0.95
1 dna_s754 ACTCCATC GATCAAGG 1 15655908010 14953976991 612290165310 39.11 0.96
1 dna_s754 ACTCCATC GATCAAGG 2 15655908010 14673083001 606138750582 38.72 0.94
1 dna_s755 GTTGACCT CAGTGCTT 1 5244001990 5005822836 204958312644 39.08 0.95
1 dna_s755 GTTGACCT CAGTGCTT 2 5244001990 4961873950 204009221335 38.90 0.95
1 dna_s756 CGTGTGTA CCAACGAA 1 7480644039 7122213223 291915210352 39.02 0.95
1 dna_s756 CGTGTGTA CCAACGAA 2 7480644039 7074149555 290885701016 38.89 0.95
1 dna_s757 ACGACTTG AACAGCGA 1 7090585520 6767397976 277091621410 39.08 0.95
1 dna_s757 ACGACTTG AACAGCGA 2 7090585520 6708945391 275830889362 38.90 0.95
1 dna_s758 CACTAGCT TCGGATTC 1 3741063656 3571332630 146216399268 39.08 0.95
1 dna_s758 CACTAGCT TCGGATTC 2 3741063656 3540267919 145532468293 38.90 0.95
1 dna_s759 ACTAGGAG TATGGCAC 1 6379179371 6098882800 249590296834 39.13 0.96
1 dna_s759 ACTAGGAG TATGGCAC 2 6379179371 6038467524 248235364887 38.91 0.95
1 dna_s760 GTAGGAGT GTCCTAAG 1 5447464826 5203806500 213020953718 39.10 0.96
1 dna_s760 GTAGGAGT GTCCTAAG 2 5447464826 5171533567 212283723511 38.97 0.95
1 dna_s761 CCTGATTG GCTCAGTT 1 6739349554 6431624082 263319244149 39.07 0.95
1 dna_s761 CCTGATTG GCTCAGTT 2 6739349554 6391082538 262483438896 38.95 0.95
1 dna_s762 ATGCACGA AGATCGTC 1 4471853373 4270262911 174878634223 39.11 0.95
1 dna_s762 ATGCACGA AGATCGTC 2 4471853373 4214903316 173603048028 38.82 0.94
1 dna_s763 CGACGTTA CTCTGGAT 1 5689307181 5424845388 222218297355 39.06 0.95
1 dna_s763 CGACGTTA CTCTGGAT 2 5689307181 5382666201 221326632246 38.90 0.95
1 dna_s764 TACGCCTT GCTACTCT 1 4780969701 4553765237 186599892899 39.03 0.95
1 dna_s764 TACGCCTT GCTACTCT 2 4780969701 4527714845 186050503739 38.91 0.95
1 dna_s765 CCGTAAGA AGAGTCCA 1 3593599623 3427915400 140388974984 39.07 0.95
1 dna_s765 CCGTAAGA AGAGTCCA 2 3593599623 3379448855 139131489302 38.72 0.94
1 dna_s766 ATCACACG GTAGCGTA 1 5415417341 5164638446 211577952965 39.07 0.95
1 dna_s766 ATCACACG GTAGCGTA 2 5415417341 5099408166 209914631949 38.76 0.94
1 dna_s767 CACCTGTT AGGATAGC 1 4407688792 4215185508 172427966016 39.12 0.96
1 dna_s767 CACCTGTT AGGATAGC 2 4407688792 4159698980 171185991854 38.84 0.94
1 dna_s768 CTTCGACT GATCTTGC 1 4374666149 4176794085 170995352910 39.09 0.95
1 dna_s768 CTTCGACT GATCTTGC 2 4374666149 4137382802 170140381196 38.89 0.95
1 dna_s769 TGCTTCCA CGATCGAT 1 4562517699 4342203350 178058599460 39.03 0.95
1 dna_s769 TGCTTCCA CGATCGAT 2 4562517699 4309395569 177294547685 38.86 0.94
1 dna_s770 AGAACGAG ATTAGCCG 1 6650604136 6344852369 259946410721 39.09 0.95
1 dna_s770 AGAACGAG ATTAGCCG 2 6650604136 6266026711 258192176251 38.82 0.94
1 dna_s771 GTTCTCGT TGTTCCGT 1 4924746918 4706059161 192648701247 39.12 0.96
1 dna_s771 GTTCTCGT TGTTCCGT 2 4924746918 4658406491 191568720350 38.90 0.95
1 dna_s772 TCAGGCTT ATCATGCG 1 5579988617 5322341260 217996406116 39.07 0.95
1 dna_s772 TCAGGCTT ATCATGCG 2 5579988617 5270644526 216861066842 38.86 0.94
1 dna_s773 CCTTGTAG CCTTGGAA 1 7566935858 7229343985 295869913156 39.10 0.96
1 dna_s773 CCTTGTAG CCTTGGAA 2 7566935858 7170602518 294618324265 38.93 0.95
1 dna_s774 GAACATCG TCGACAAG 1 5459175631 5199648056 213171849992 39.05 0.95
1 dna_s774 GAACATCG TCGACAAG 2 5459175631 5163227420 212330910146 38.89 0.95
1 dna_s775 TAACCGGT ATCGTCTC 1 4345487966 4150503740 169922753051 39.10 0.96
1 dna_s775 TAACCGGT ATCGTCTC 2 4345487966 4101713287 168807693094 38.85 0.94
1 dna_s776 AACCGTTC CTAGCTCA 1 3718834795 3546966886 145295953900 39.07 0.95
1 dna_s776 AACCGTTC CTAGCTCA 2 3718834795 3517275997 144622671511 38.89 0.95
1 dna_s777 TGGTACAG TCGAGAGT 1 7043562308 6717462142 275157819757 39.07 0.95
1 dna_s777 TGGTACAG TCGAGAGT 2 7043562308 6671184243 274153235433 38.92 0.95
1 dna_s778 ATATGCGC ACGATCAG 1 2653976 2455643 102069074 38.46 0.93
1 dna_s778 ATATGCGC ACGATCAG 2 2653976 2024909 91683722 34.55 0.76
1 Undetermined 1 35604864404 29447333382 1286875167396 36.14 0.83
1 Undetermined 2 35604864404 29720705496 1286833164264 36.14 0.83
99 rows