File Info
- Filename
- Quality_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0034/B2372Y3LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L007/Reports/Quality_Metrics.csv
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- 4.0 KB
- Workflow Run
- cgp_rna_exp0034_73d51683
- Published
- Jun 07, 2026 11:31 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 7 | dna_s707 | CTGATCGT | GCGCATAT | 1 | 17783325568 | 16848518343 | 692278310553 | 38.93 | 0.95 |
| 7 | dna_s707 | CTGATCGT | GCGCATAT | 2 | 17783325568 | 16628909343 | 687355007982 | 38.65 | 0.94 |
| 7 | dna_s708 | CTTGTCGA | CGATGTTC | 1 | 25732290218 | 24408580772 | 1002212240432 | 38.95 | 0.95 |
| 7 | dna_s708 | CTTGTCGA | CGATGTTC | 2 | 25732290218 | 24277481736 | 999628616877 | 38.85 | 0.94 |
| 7 | dna_s709 | ACGGAACA | ACGAGAAC | 1 | 20745105253 | 19770927096 | 810148746603 | 39.05 | 0.95 |
| 7 | dna_s709 | ACGGAACA | ACGAGAAC | 2 | 20745105253 | 19623334302 | 807029126628 | 38.90 | 0.95 |
| 7 | dna_s710 | GCAAGATC | AGTCGAAG | 1 | 18438666021 | 17485220681 | 718013348168 | 38.94 | 0.95 |
| 7 | dna_s710 | GCAAGATC | AGTCGAAG | 2 | 18438666021 | 17341534477 | 714897456451 | 38.77 | 0.94 |
| 7 | dna_s711 | GCTATCCT | AACAGGTG | 1 | 20287855358 | 19255780017 | 790366625532 | 38.96 | 0.95 |
| 7 | dna_s711 | GCTATCCT | AACAGGTG | 2 | 20287855358 | 19109072101 | 787310404255 | 38.81 | 0.94 |
| 7 | dna_s712 | ATCCAGAG | TAACGTCG | 1 | 33501419153 | 31896597616 | 1307518547689 | 39.03 | 0.95 |
| 7 | dna_s712 | ATCCAGAG | TAACGTCG | 2 | 33501419153 | 31651282005 | 1302379312575 | 38.88 | 0.94 |
| 7 | dna_s713 | AACTGAGC | CAATCAGG | 1 | 20481898663 | 19452041591 | 798486328550 | 38.98 | 0.95 |
| 7 | dna_s713 | AACTGAGC | CAATCAGG | 2 | 20481898663 | 19260235338 | 794031129999 | 38.77 | 0.94 |
| 7 | dna_s714 | GAATCCGA | AGCTAGTG | 1 | 18739112533 | 17826083286 | 731193811614 | 39.02 | 0.95 |
| 7 | dna_s714 | GAATCCGA | AGCTAGTG | 2 | 18739112533 | 17603255040 | 726171871641 | 38.75 | 0.94 |
| 7 | dna_s715 | TTCGTTGG | TACACACG | 1 | 32013516040 | 30422435050 | 1248346616536 | 38.99 | 0.95 |
| 7 | dna_s715 | TTCGTTGG | TACACACG | 2 | 32013516040 | 30264952810 | 1244729531344 | 38.88 | 0.95 |
| 7 | dna_s716 | GTCGAAGA | CCACATTG | 1 | 19358113024 | 18347371929 | 753498517086 | 38.92 | 0.95 |
| 7 | dna_s716 | GTCGAAGA | CCACATTG | 2 | 19358113024 | 18252012814 | 751743211972 | 38.83 | 0.94 |
| 7 | dna_s717 | ACCACGAT | GTCTGCAA | 1 | 24941192611 | 23680033775 | 971763280061 | 38.96 | 0.95 |
| 7 | dna_s717 | ACCACGAT | GTCTGCAA | 2 | 24941192611 | 23488571226 | 967727747856 | 38.80 | 0.94 |
| 7 | dna_s718 | GCACAACT | CTGAACGT | 1 | 23099910238 | 21946087933 | 900298088524 | 38.97 | 0.95 |
| 7 | dna_s718 | GCACAACT | CTGAACGT | 2 | 23099910238 | 21803402684 | 897560529017 | 38.86 | 0.94 |
| 7 | dna_s719 | ATCCGGTA | GACCGATA | 1 | 27834681036 | 26444458994 | 1084918072661 | 38.98 | 0.95 |
| 7 | dna_s719 | ATCCGGTA | GACCGATA | 2 | 27834681036 | 26278309664 | 1081589531237 | 38.86 | 0.94 |
| 7 | dna_s720 | CGTTGCAA | ATAGAGCG | 1 | 20047752825 | 19070241900 | 782152451610 | 39.01 | 0.95 |
| 7 | dna_s720 | CGTTGCAA | ATAGAGCG | 2 | 20047752825 | 18911654599 | 778782891430 | 38.85 | 0.94 |
| 7 | dna_s721 | CATGGCTA | CACACATC | 1 | 31774542836 | 30101729763 | 1236543462666 | 38.92 | 0.95 |
| 7 | dna_s721 | CATGGCTA | CACACATC | 2 | 31774542836 | 29905492438 | 1232462474701 | 38.79 | 0.94 |
| 7 | dna_s722 | ATGCCTGT | AGATTGCG | 1 | 22723050176 | 21612521396 | 886709647781 | 39.02 | 0.95 |
| 7 | dna_s722 | ATGCCTGT | AGATTGCG | 2 | 22723050176 | 21301294869 | 879254207133 | 38.69 | 0.94 |
| 7 | dna_s723 | CAACACCT | AGCTACCA | 1 | 20595883731 | 19563100891 | 802721862490 | 38.97 | 0.95 |
| 7 | dna_s723 | CAACACCT | AGCTACCA | 2 | 20595883731 | 19391278998 | 798918148548 | 38.79 | 0.94 |
| 7 | dna_s724 | GTCATCGA | GATCCACT | 1 | 17857426704 | 16973055154 | 696286623778 | 38.99 | 0.95 |
| 7 | dna_s724 | GTCATCGA | GATCCACT | 2 | 17857426704 | 16856873772 | 693923773803 | 38.86 | 0.94 |
| 7 | dna_s725 | GAAGGAAG | GACGTCAT | 1 | 31103950326 | 29619982932 | 1214320944117 | 39.04 | 0.95 |
| 7 | dna_s725 | GAAGGAAG | GACGTCAT | 2 | 31103950326 | 29336501478 | 1208130786111 | 38.84 | 0.94 |
| 7 | dna_s726 | GTTGTTCG | CCAACTTC | 1 | 31705432552 | 30096976585 | 1235288957227 | 38.96 | 0.95 |
| 7 | dna_s726 | GTTGTTCG | CCAACTTC | 2 | 31705432552 | 29843086676 | 1229791513652 | 38.79 | 0.94 |
| 7 | dna_s727 | CGGTTGTT | GTGGTATG | 1 | 26502383876 | 25182051999 | 1032883870746 | 38.97 | 0.95 |
| 7 | dna_s727 | CGGTTGTT | GTGGTATG | 2 | 26502383876 | 24927571509 | 1027562350923 | 38.77 | 0.94 |
| 7 | dna_s728 | GTTACGCA | ATGGCGAT | 1 | 21769555693 | 20700446342 | 849152850893 | 39.01 | 0.95 |
| 7 | dna_s728 | GTTACGCA | ATGGCGAT | 2 | 21769555693 | 20487073301 | 844516543727 | 38.79 | 0.94 |
| 7 | dna_s729 | AGCGTGTT | CTTCGCAA | 1 | 36795418921 | 34983645547 | 1434704773672 | 38.99 | 0.95 |
| 7 | dna_s729 | AGCGTGTT | CTTCGCAA | 2 | 36795418921 | 34814139628 | 1431429867985 | 38.90 | 0.95 |
| 7 | dna_s730 | GATCGAGT | GACGAACT | 1 | 28087270212 | 26730175195 | 1096030547167 | 39.02 | 0.95 |
| 7 | dna_s730 | GATCGAGT | GACGAACT | 2 | 28087270212 | 26533176617 | 1091761501889 | 38.87 | 0.94 |
| 7 | Undetermined | 1 | 29482969403 | 23956248506 | 1054792546403 | 35.78 | 0.81 | ||
| 7 | Undetermined | 2 | 29482969403 | 24020289912 | 1050636573192 | 35.64 | 0.81 |
51 rows