File Info
- Filename
- Demultiplex_Stats.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0034/B2372Y3LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L004/Reports/Demultiplex_Stats.csv
- Size
- 4.2 KB
- Workflow Run
- cgp_rna_exp0034_73d51683
- Published
- Jun 07, 2026 11:33 PM
Content
View in new tab| Lane | SampleID | Index | # Reads | # Perfect Index Reads | # One Mismatch Index Reads | # Two Mismatch Index Reads | % Reads | % Perfect Index Reads | % One Mismatch Index Reads | % Two Mismatch Index Reads |
| 4 | dna_s731 | GAGCAGTA-TGAGCTGT | 153887536 | 150913402 | 2974134 | 0 | 0.0368 | 0.9807 | 0.0193 | 0.0000 |
| 4 | dna_s732 | AGTTCGTC-ACTCGATC | 85446417 | 84097029 | 1349388 | 0 | 0.0205 | 0.9842 | 0.0158 | 0.0000 |
| 4 | dna_s733 | TTGCGAAG-AACACGCT | 184863654 | 181679408 | 3184246 | 0 | 0.0443 | 0.9828 | 0.0172 | 0.0000 |
| 4 | dna_s734 | ATCGCCAT-TGCGTAAC | 114870439 | 112483347 | 2387092 | 0 | 0.0275 | 0.9792 | 0.0208 | 0.0000 |
| 4 | dna_s735 | TGGCATGT-CGTCTTCA | 124046582 | 121865787 | 2180795 | 0 | 0.0297 | 0.9824 | 0.0176 | 0.0000 |
| 4 | dna_s736 | CTGTTGAC-ACCTCAGT | 130110095 | 127821359 | 2288736 | 0 | 0.0312 | 0.9824 | 0.0176 | 0.0000 |
| 4 | dna_s737 | CATACCAC-AACAACCG | 114598206 | 112169441 | 2428765 | 0 | 0.0274 | 0.9788 | 0.0212 | 0.0000 |
| 4 | dna_s738 | GAAGTTGG-CGAACAAC | 176358086 | 172872846 | 3485240 | 0 | 0.0422 | 0.9802 | 0.0198 | 0.0000 |
| 4 | dna_s739 | ATGACGTC-CTTCCTTC | 1881907 | 1848431 | 33476 | 0 | 0.0005 | 0.9822 | 0.0178 | 0.0000 |
| 4 | dna_s740 | TTGGACGT-GAAGTGCT | 136395431 | 134090139 | 2305292 | 0 | 0.0327 | 0.9831 | 0.0169 | 0.0000 |
| 4 | dna_s741 | AGTGGATC-TCGATGAC | 95658334 | 93932001 | 1726333 | 0 | 0.0229 | 0.9820 | 0.0180 | 0.0000 |
| 4 | dna_s742 | GATAGGCT-CAGTCACA | 187499292 | 184470388 | 3028904 | 0 | 0.0449 | 0.9838 | 0.0162 | 0.0000 |
| 4 | dna_s743 | TGGTAGCT-AGGTGTTG | 10309304 | 10111078 | 198226 | 0 | 0.0025 | 0.9808 | 0.0192 | 0.0000 |
| 4 | dna_s744 | CGCAATCT-ACAGGCAT | 115440256 | 113093726 | 2346530 | 0 | 0.0276 | 0.9797 | 0.0203 | 0.0000 |
| 4 | dna_s745 | GATGTGTG-TAGCCATG | 145260184 | 142256967 | 3003217 | 0 | 0.0348 | 0.9793 | 0.0207 | 0.0000 |
| 4 | dna_s746 | GATTGCTC-CACTTCAC | 111885942 | 109701492 | 2184450 | 0 | 0.0268 | 0.9805 | 0.0195 | 0.0000 |
| 4 | dna_s747 | CGCTCTAT-TTGCAACG | 140267594 | 136568727 | 3698867 | 0 | 0.0336 | 0.9736 | 0.0264 | 0.0000 |
| 4 | dna_s748 | TATCGGTC-TACCGGAT | 137952764 | 135509747 | 2443017 | 0 | 0.0330 | 0.9823 | 0.0177 | 0.0000 |
| 4 | dna_s749 | AACGTCTG-AATGACGC | 204277282 | 199934312 | 4342970 | 0 | 0.0489 | 0.9787 | 0.0213 | 0.0000 |
| 4 | dna_s750 | ACGTTCAG-AGTTGTGC | 178202518 | 174769240 | 3433278 | 0 | 0.0427 | 0.9807 | 0.0193 | 0.0000 |
| 4 | dna_s751 | CAGTCCAA-CGGTAATC | 137400025 | 134147918 | 3252107 | 0 | 0.0329 | 0.9763 | 0.0237 | 0.0000 |
| 4 | dna_s752 | TTGCAGAC-ATCGTGGT | 126966949 | 124760321 | 2206628 | 0 | 0.0304 | 0.9826 | 0.0174 | 0.0000 |
| 4 | dna_s753 | CAATGTGG-TCTTCGAC | 209848278 | 206409873 | 3438405 | 0 | 0.0502 | 0.9836 | 0.0164 | 0.0000 |
| 4 | dna_s754 | ACTCCATC-GATCAAGG | 104627650 | 102586477 | 2041173 | 0 | 0.0251 | 0.9805 | 0.0195 | 0.0000 |
| 4 | dna_s755 | GTTGACCT-CAGTGCTT | 35063783 | 34343055 | 720728 | 0 | 0.0084 | 0.9794 | 0.0206 | 0.0000 |
| 4 | dna_s756 | CGTGTGTA-CCAACGAA | 49396315 | 48533083 | 863232 | 0 | 0.0118 | 0.9825 | 0.0175 | 0.0000 |
| 4 | dna_s757 | ACGACTTG-AACAGCGA | 46948258 | 45937472 | 1010786 | 0 | 0.0112 | 0.9785 | 0.0215 | 0.0000 |
| 4 | dna_s758 | CACTAGCT-TCGGATTC | 25204229 | 24732347 | 471882 | 0 | 0.0060 | 0.9813 | 0.0187 | 0.0000 |
| 4 | dna_s759 | ACTAGGAG-TATGGCAC | 42192326 | 41134038 | 1058288 | 0 | 0.0101 | 0.9749 | 0.0251 | 0.0000 |
| 4 | dna_s760 | GTAGGAGT-GTCCTAAG | 36471769 | 35731856 | 739913 | 0 | 0.0087 | 0.9797 | 0.0203 | 0.0000 |
| 4 | dna_s761 | CCTGATTG-GCTCAGTT | 44760137 | 43488592 | 1271545 | 0 | 0.0107 | 0.9716 | 0.0284 | 0.0000 |
| 4 | dna_s762 | ATGCACGA-AGATCGTC | 29188927 | 28491678 | 697249 | 0 | 0.0070 | 0.9761 | 0.0239 | 0.0000 |
| 4 | dna_s763 | CGACGTTA-CTCTGGAT | 37929917 | 36874586 | 1055331 | 0 | 0.0091 | 0.9722 | 0.0278 | 0.0000 |
| 4 | dna_s764 | TACGCCTT-GCTACTCT | 32146697 | 31461419 | 685278 | 0 | 0.0077 | 0.9787 | 0.0213 | 0.0000 |
| 4 | dna_s765 | CCGTAAGA-AGAGTCCA | 23958222 | 23295370 | 662852 | 0 | 0.0057 | 0.9723 | 0.0277 | 0.0000 |
| 4 | dna_s766 | ATCACACG-GTAGCGTA | 35792352 | 34366762 | 1425590 | 0 | 0.0086 | 0.9602 | 0.0398 | 0.0000 |
| 4 | dna_s767 | CACCTGTT-AGGATAGC | 29052139 | 28277863 | 774276 | 0 | 0.0070 | 0.9733 | 0.0267 | 0.0000 |
| 4 | dna_s768 | CTTCGACT-GATCTTGC | 29087483 | 28483718 | 603765 | 0 | 0.0070 | 0.9792 | 0.0208 | 0.0000 |
| 4 | dna_s769 | TGCTTCCA-CGATCGAT | 29853881 | 29149283 | 704598 | 0 | 0.0071 | 0.9764 | 0.0236 | 0.0000 |
| 4 | dna_s770 | AGAACGAG-ATTAGCCG | 44121077 | 40721544 | 3399533 | 0 | 0.0106 | 0.9229 | 0.0771 | 0.0000 |
| 4 | dna_s771 | GTTCTCGT-TGTTCCGT | 32794460 | 32253143 | 541317 | 0 | 0.0079 | 0.9835 | 0.0165 | 0.0000 |
| 4 | dna_s772 | TCAGGCTT-ATCATGCG | 36950509 | 36226709 | 723800 | 0 | 0.0088 | 0.9804 | 0.0196 | 0.0000 |
| 4 | dna_s773 | CCTTGTAG-CCTTGGAA | 49974927 | 48862252 | 1112675 | 0 | 0.0120 | 0.9777 | 0.0223 | 0.0000 |
| 4 | dna_s774 | GAACATCG-TCGACAAG | 36154257 | 35215979 | 938278 | 0 | 0.0087 | 0.9740 | 0.0260 | 0.0000 |
| 4 | dna_s775 | TAACCGGT-ATCGTCTC | 29300282 | 28547421 | 752861 | 0 | 0.0070 | 0.9743 | 0.0257 | 0.0000 |
| 4 | dna_s776 | AACCGTTC-CTAGCTCA | 25076170 | 24508529 | 567641 | 0 | 0.0060 | 0.9774 | 0.0226 | 0.0000 |
| 4 | dna_s777 | TGGTACAG-TCGAGAGT | 46719375 | 45818364 | 901011 | 0 | 0.0112 | 0.9807 | 0.0193 | 0.0000 |
| 4 | dna_s778 | ATATGCGC-ACGATCAG | 17605 | 17269 | 336 | 0 | 0.0000 | 0.9809 | 0.0191 | 0.0000 |
| 4 | Undetermined | 220506468 | 220506468 | 0 | 0 | 0.0528 | 1.0000 | 0.0000 | 0.0000 |
50 rows