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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0034/B2372Y3LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L004/Reports/Quality_Metrics.csv
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Workflow Run
cgp_rna_exp0034_73d51683
Published
Jun 07, 2026 11:33 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
4 dna_s731 GAGCAGTA TGAGCTGT 1 23237017936 22089737133 906118878516 38.99 0.95
4 dna_s731 GAGCAGTA TGAGCTGT 2 23237017936 21938892122 902918485010 38.86 0.94
4 dna_s732 AGTTCGTC ACTCGATC 1 12902408967 12098504769 498761813319 38.66 0.94
4 dna_s732 AGTTCGTC ACTCGATC 2 12902408967 12063058701 498687647466 38.65 0.93
4 dna_s733 TTGCGAAG AACACGCT 1 27914411754 26349968161 1084373362507 38.85 0.94
4 dna_s733 TTGCGAAG AACACGCT 2 27914411754 26225146991 1081786236176 38.75 0.94
4 dna_s734 ATCGCCAT TGCGTAAC 1 17345436289 16450935255 675579262893 38.95 0.95
4 dna_s734 ATCGCCAT TGCGTAAC 2 17345436289 16291207792 671881168975 38.74 0.94
4 dna_s735 TGGCATGT CGTCTTCA 1 18731033882 17746342383 729148414473 38.93 0.95
4 dna_s735 TGGCATGT CGTCTTCA 2 18731033882 17646178834 726875936098 38.81 0.94
4 dna_s736 CTGTTGAC ACCTCAGT 1 19646624345 18563006178 763450478709 38.86 0.94
4 dna_s736 CTGTTGAC ACCTCAGT 2 19646624345 18490619548 761979324088 38.78 0.94
4 dna_s737 CATACCAC AACAACCG 1 17304329106 16394842821 673301649552 38.91 0.95
4 dna_s737 CATACCAC AACAACCG 2 17304329106 16307659262 671654965985 38.81 0.94
4 dna_s738 GAAGTTGG CGAACAAC 1 26630070986 25346707762 1039590713722 39.04 0.95
4 dna_s738 GAAGTTGG CGAACAAC 2 26630070986 25141594533 1035060587370 38.87 0.94
4 dna_s739 ATGACGTC CTTCCTTC 1 284167957 261520031 10863116999 38.23 0.92
4 dna_s739 ATGACGTC CTTCCTTC 2 284167957 260901633 10876222740 38.27 0.92
4 dna_s740 TTGGACGT GAAGTGCT 1 20595710081 19598540144 803805735482 39.03 0.95
4 dna_s740 TTGGACGT GAAGTGCT 2 20595710081 19443720246 800277584844 38.86 0.94
4 dna_s741 AGTGGATC TCGATGAC 1 14444408434 13661243125 561463481341 38.87 0.95
4 dna_s741 AGTGGATC TCGATGAC 2 14444408434 13616559000 560684501325 38.82 0.94
4 dna_s742 GATAGGCT CAGTCACA 1 28312393092 26897476367 1103559373712 38.98 0.95
4 dna_s742 GATAGGCT CAGTCACA 2 28312393092 26777686837 1101090504091 38.89 0.95
4 dna_s743 TGGTAGCT AGGTGTTG 1 1556704904 1464054077 60289827566 38.73 0.94
4 dna_s743 TGGTAGCT AGGTGTTG 2 1556704904 1456673583 60189080826 38.66 0.94
4 dna_s744 CGCAATCT ACAGGCAT 1 17431478656 16544550601 678983758237 38.95 0.95
4 dna_s744 CGCAATCT ACAGGCAT 2 17431478656 16433836227 676658978580 38.82 0.94
4 dna_s745 GATGTGTG TAGCCATG 1 21934287784 20554501226 847740197786 38.65 0.94
4 dna_s745 GATGTGTG TAGCCATG 2 21934287784 20479552453 846846796981 38.61 0.93
4 dna_s746 GATTGCTC CACTTCAC 1 16894777242 15941140775 655785179603 38.82 0.94
4 dna_s746 GATTGCTC CACTTCAC 2 16894777242 15894823209 655166217705 38.78 0.94
4 dna_s747 CGCTCTAT TTGCAACG 1 21180406694 20237029428 828837745923 39.13 0.96
4 dna_s747 CGCTCTAT TTGCAACG 2 21180406694 19821029974 819391508488 38.69 0.94
4 dna_s748 TATCGGTC TACCGGAT 1 20830867364 19848431847 813709203756 39.06 0.95
4 dna_s748 TATCGGTC TACCGGAT 2 20830867364 19582900065 807753118962 38.78 0.94
4 dna_s749 AACGTCTG AATGACGC 1 30845869582 29404321585 1204953539716 39.06 0.95
4 dna_s749 AACGTCTG AATGACGC 2 30845869582 28960200578 1195412949242 38.75 0.94
4 dna_s750 ACGTTCAG AGTTGTGC 1 26908580218 25630983684 1051119481125 39.06 0.95
4 dna_s750 ACGTTCAG AGTTGTGC 2 26908580218 25189124616 1041401376777 38.70 0.94
4 dna_s751 CAGTCCAA CGGTAATC 1 20747403775 19739501427 809960071644 39.04 0.95
4 dna_s751 CAGTCCAA CGGTAATC 2 20747403775 19528843596 805037451633 38.80 0.94
4 dna_s752 TTGCAGAC ATCGTGGT 1 19172009299 18292267222 749527870633 39.09 0.95
4 dna_s752 TTGCAGAC ATCGTGGT 2 19172009299 18024273318 743218399215 38.77 0.94
4 dna_s753 CAATGTGG TCTTCGAC 1 31687089978 30209558324 1237990209731 39.07 0.95
4 dna_s753 CAATGTGG TCTTCGAC 2 31687089978 29957368242 1232442025257 38.89 0.95
4 dna_s754 ACTCCATC GATCAAGG 1 15798775150 15060325117 617320936504 39.07 0.95
4 dna_s754 ACTCCATC GATCAAGG 2 15798775150 14765054102 610832401064 38.66 0.93
4 dna_s755 GTTGACCT CAGTGCTT 1 5294631233 5049358002 206857083123 39.07 0.95
4 dna_s755 GTTGACCT CAGTGCTT 2 5294631233 5004583762 205887380857 38.89 0.95
4 dna_s756 CGTGTGTA CCAACGAA 1 7458843565 7095044346 290944491504 39.01 0.95
4 dna_s756 CGTGTGTA CCAACGAA 2 7458843565 7048166218 289952607691 38.87 0.94
4 dna_s757 ACGACTTG AACAGCGA 1 7089186958 6758869105 276902913955 39.06 0.95
4 dna_s757 ACGACTTG AACAGCGA 2 7089186958 6701297622 275667053382 38.89 0.95
4 dna_s758 CACTAGCT TCGGATTC 1 3805838579 3629088304 148674672598 39.06 0.95
4 dna_s758 CACTAGCT TCGGATTC 2 3805838579 3597271403 147974941535 38.88 0.95
4 dna_s759 ACTAGGAG TATGGCAC 1 6371041226 6084473593 249158814235 39.11 0.96
4 dna_s759 ACTAGGAG TATGGCAC 2 6371041226 6024074574 247801296822 38.89 0.95
4 dna_s760 GTAGGAGT GTCCTAAG 1 5507237119 5256404755 215286798628 39.09 0.95
4 dna_s760 GTAGGAGT GTCCTAAG 2 5507237119 5224158799 214543155517 38.96 0.95
4 dna_s761 CCTGATTG GCTCAGTT 1 6758780687 6444817300 263983587781 39.06 0.95
4 dna_s761 CCTGATTG GCTCAGTT 2 6758780687 6406238988 263194685232 38.94 0.95
4 dna_s762 ATGCACGA AGATCGTC 1 4407527977 4202041754 172236268559 39.08 0.95
4 dna_s762 ATGCACGA AGATCGTC 2 4407527977 4146259906 170954200015 38.79 0.94
4 dna_s763 CGACGTTA CTCTGGAT 1 5727417467 5455567067 223605735503 39.04 0.95
4 dna_s763 CGACGTTA CTCTGGAT 2 5727417467 5413439702 222717211550 38.89 0.95
4 dna_s764 TACGCCTT GCTACTCT 1 4854151247 4620292906 189405771565 39.02 0.95
4 dna_s764 TACGCCTT GCTACTCT 2 4854151247 4594057499 188850935759 38.91 0.95
4 dna_s765 CCGTAAGA AGAGTCCA 1 3617691522 3447106396 141261443515 39.05 0.95
4 dna_s765 CCGTAAGA AGAGTCCA 2 3617691522 3398733633 140009686458 38.70 0.94
4 dna_s766 ATCACACG GTAGCGTA 1 5404645152 5146557209 211010015357 39.04 0.95
4 dna_s766 ATCACACG GTAGCGTA 2 5404645152 5083872770 209405381564 38.75 0.94
4 dna_s767 CACCTGTT AGGATAGC 1 4386872989 4190895789 171535313190 39.10 0.96
4 dna_s767 CACCTGTT AGGATAGC 2 4386872989 4134445406 170274644831 38.81 0.94
4 dna_s768 CTTCGACT GATCTTGC 1 4392209933 4190111319 171624616950 39.07 0.95
4 dna_s768 CTTCGACT GATCTTGC 2 4392209933 4149916163 170750936204 38.88 0.94
4 dna_s769 TGCTTCCA CGATCGAT 1 4507936031 4283153681 175790708279 39.00 0.95
4 dna_s769 TGCTTCCA CGATCGAT 2 4507936031 4253373852 175095159663 38.84 0.94
4 dna_s770 AGAACGAG ATTAGCCG 1 6662282627 6342990587 260164623482 39.05 0.95
4 dna_s770 AGAACGAG ATTAGCCG 2 6662282627 6265025914 258417593368 38.79 0.94
4 dna_s771 GTTCTCGT TGTTCCGT 1 4951963460 4726559551 193621311505 39.10 0.95
4 dna_s771 GTTCTCGT TGTTCCGT 2 4951963460 4677673477 192506815474 38.87 0.94
4 dna_s772 TCAGGCTT ATCATGCG 1 5579526859 5316428187 217885332066 39.05 0.95
4 dna_s772 TCAGGCTT ATCATGCG 2 5579526859 5265317522 216758845121 38.85 0.94
4 dna_s773 CCTTGTAG CCTTGGAA 1 7546213977 7202497149 294936643155 39.08 0.95
4 dna_s773 CCTTGTAG CCTTGGAA 2 7546213977 7143764192 293685622358 38.92 0.95
4 dna_s774 GAACATCG TCGACAAG 1 5459292807 5190104079 212993665476 39.01 0.95
4 dna_s774 GAACATCG TCGACAAG 2 5459292807 5157326863 212230473382 38.88 0.94
4 dna_s775 TAACCGGT ATCGTCTC 1 4424342582 4221912360 172943406081 39.09 0.95
4 dna_s775 TAACCGGT ATCGTCTC 2 4424342582 4171717969 171796481899 38.83 0.94
4 dna_s776 AACCGTTC CTAGCTCA 1 3786501670 3607543271 147871712006 39.05 0.95
4 dna_s776 AACCGTTC CTAGCTCA 2 3786501670 3577924567 147196113298 38.87 0.94
4 dna_s777 TGGTACAG TCGAGAGT 1 7054625625 6720706387 275452841722 39.05 0.95
4 dna_s777 TGGTACAG TCGAGAGT 2 7054625625 6677839723 274529171143 38.91 0.95
4 dna_s778 ATATGCGC ACGATCAG 1 2658355 2459861 102266153 38.47 0.93
4 dna_s778 ATATGCGC ACGATCAG 2 2658355 1998439 91086706 34.26 0.75
4 Undetermined 1 33296476668 27458505772 1201951150753 36.10 0.82
4 Undetermined 2 33296476668 27792895308 1203466760307 36.14 0.83
99 rows