File Info

Filename
Quality_Metrics.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0034/B2372Y3LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L006/Reports/Quality_Metrics.csv
Size
4.0 KB
Workflow Run
cgp_rna_exp0034_73d51683
Published
Jun 07, 2026 11:36 PM

Content

View in new tab
Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
6 dna_s707 CTGATCGT GCGCATAT 1 17642274958 16711387454 686776492913 38.93 0.95
6 dna_s707 CTGATCGT GCGCATAT 2 17642274958 16500046023 682012959015 38.66 0.94
6 dna_s708 CTTGTCGA CGATGTTC 1 25559255241 24235459120 995300781616 38.94 0.95
6 dna_s708 CTTGTCGA CGATGTTC 2 25559255241 24116385702 993001529004 38.85 0.94
6 dna_s709 ACGGAACA ACGAGAAC 1 20596401661 19624129635 804245527695 39.05 0.95
6 dna_s709 ACGGAACA ACGAGAAC 2 20596401661 19483454503 801300479023 38.90 0.95
6 dna_s710 GCAAGATC AGTCGAAG 1 18279219836 17331002448 711780633375 38.94 0.95
6 dna_s710 GCAAGATC AGTCGAAG 2 18279219836 17195349195 708836371167 38.78 0.94
6 dna_s711 GCTATCCT AACAGGTG 1 20133795494 19106813876 784348581449 38.96 0.95
6 dna_s711 GCTATCCT AACAGGTG 2 20133795494 18965379596 781402821254 38.81 0.94
6 dna_s712 ATCCAGAG TAACGTCG 1 33181218368 31584941503 1294910485069 39.03 0.95
6 dna_s712 ATCCAGAG TAACGTCG 2 33181218368 31350468153 1290039102555 38.88 0.94
6 dna_s713 AACTGAGC CAATCAGG 1 20349609677 19325806913 793382262680 38.99 0.95
6 dna_s713 AACTGAGC CAATCAGG 2 20349609677 19138517446 789008325952 38.77 0.94
6 dna_s714 GAATCCGA AGCTAGTG 1 18531221320 17620055213 722926681715 39.01 0.95
6 dna_s714 GAATCCGA AGCTAGTG 2 18531221320 17410320589 718209319816 38.76 0.94
6 dna_s715 TTCGTTGG TACACACG 1 31711630800 30132024439 1236571915186 38.99 0.95
6 dna_s715 TTCGTTGG TACACACG 2 31711630800 29979234142 1233056640853 38.88 0.95
6 dna_s716 GTCGAAGA CCACATTG 1 19241613202 18232094618 748872525773 38.92 0.95
6 dna_s716 GTCGAAGA CCACATTG 2 19241613202 18142803585 747275196087 38.84 0.94
6 dna_s717 ACCACGAT GTCTGCAA 1 24713140633 23459646455 962845016798 38.96 0.95
6 dna_s717 ACCACGAT GTCTGCAA 2 24713140633 23278240256 959024276615 38.81 0.94
6 dna_s718 GCACAACT CTGAACGT 1 23030936458 21877193675 897579316205 38.97 0.95
6 dna_s718 GCACAACT CTGAACGT 2 23030936458 21740694735 894982160358 38.86 0.94
6 dna_s719 ATCCGGTA GACCGATA 1 27689994648 26302810389 1079217520917 38.97 0.95
6 dna_s719 ATCCGGTA GACCGATA 2 27689994648 26144280743 1076086316036 38.86 0.94
6 dna_s720 CGTTGCAA ATAGAGCG 1 19856979274 18883060217 774603992981 39.01 0.95
6 dna_s720 CGTTGCAA ATAGAGCG 2 19856979274 18732047936 771420038987 38.85 0.94
6 dna_s721 CATGGCTA CACACATC 1 31458062691 29797716887 1224161202887 38.91 0.95
6 dna_s721 CATGGCTA CACACATC 2 31458062691 29611433806 1220346057721 38.79 0.94
6 dna_s722 ATGCCTGT AGATTGCG 1 22518509502 21421763836 878870276035 39.03 0.95
6 dna_s722 ATGCCTGT AGATTGCG 2 22518509502 21113454263 871494753656 38.70 0.94
6 dna_s723 CAACACCT AGCTACCA 1 20405428337 19376748216 795214365750 38.97 0.95
6 dna_s723 CAACACCT AGCTACCA 2 20405428337 19213672474 791614737139 38.79 0.94
6 dna_s724 GTCATCGA GATCCACT 1 17795947205 16909799991 693794606223 38.99 0.95
6 dna_s724 GTCATCGA GATCCACT 2 17795947205 16798097057 691553564465 38.86 0.94
6 dna_s725 GAAGGAAG GACGTCAT 1 30963203679 29483677892 1208853237083 39.04 0.95
6 dna_s725 GAAGGAAG GACGTCAT 2 30963203679 29208697236 1202853902430 38.85 0.94
6 dna_s726 GTTGTTCG CCAACTTC 1 31390316994 29791676436 1222909988334 38.96 0.95
6 dna_s726 GTTGTTCG CCAACTTC 2 31390316994 29548807080 1217689363299 38.79 0.94
6 dna_s727 CGGTTGTT GTGGTATG 1 26255504614 24943318433 1023211304474 38.97 0.95
6 dna_s727 CGGTTGTT GTGGTATG 2 26255504614 24702041118 1018188177222 38.78 0.94
6 dna_s728 GTTACGCA ATGGCGAT 1 21682705778 20611631950 845644530292 39.00 0.95
6 dna_s728 GTTACGCA ATGGCGAT 2 21682705778 20406485051 841219675610 38.80 0.94
6 dna_s729 AGCGTGTT CTTCGCAA 1 36577924561 34773693690 1426211424867 38.99 0.95
6 dna_s729 AGCGTGTT CTTCGCAA 2 36577924561 34609659363 1423068752643 38.91 0.95
6 dna_s730 GATCGAGT GACGAACT 1 27994438130 26640534666 1092444195816 39.02 0.95
6 dna_s730 GATCGAGT GACGAACT 2 27994438130 26447424373 1088256261121 38.87 0.94
6 Undetermined 1 28618689042 23064139470 1019640240387 35.63 0.81
6 Undetermined 2 28618689042 23166088573 1016194921102 35.51 0.81
51 rows