File Info
- Filename
- Adapter_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0034/B2372Y3LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L003/Reports/Adapter_Metrics.csv
- Size
- 4.9 KB
- Workflow Run
- cgp_rna_exp0034_73d51683
- Published
- Jun 07, 2026 11:38 PM
Content
View in new tab| Lane | Sample_ID | index | index2 | ReadNumber | AdapterBases | SampleBases | % Adapter Bases |
| 3 | dna_s731 | GAGCAGTA | TGAGCTGT | 1 | 0 | 23140548566 | 0.000 |
| 3 | dna_s731 | GAGCAGTA | TGAGCTGT | 2 | 0 | 23140548566 | 0.000 |
| 3 | dna_s732 | AGTTCGTC | ACTCGATC | 1 | 0 | 12843899336 | 0.000 |
| 3 | dna_s732 | AGTTCGTC | ACTCGATC | 2 | 0 | 12843899336 | 0.000 |
| 3 | dna_s733 | TTGCGAAG | AACACGCT | 1 | 0 | 27822051094 | 0.000 |
| 3 | dna_s733 | TTGCGAAG | AACACGCT | 2 | 0 | 27822051094 | 0.000 |
| 3 | dna_s734 | ATCGCCAT | TGCGTAAC | 1 | 0 | 17224008280 | 0.000 |
| 3 | dna_s734 | ATCGCCAT | TGCGTAAC | 2 | 0 | 17224008280 | 0.000 |
| 3 | dna_s735 | TGGCATGT | CGTCTTCA | 1 | 0 | 18599828925 | 0.000 |
| 3 | dna_s735 | TGGCATGT | CGTCTTCA | 2 | 0 | 18599828925 | 0.000 |
| 3 | dna_s736 | CTGTTGAC | ACCTCAGT | 1 | 0 | 19569836164 | 0.000 |
| 3 | dna_s736 | CTGTTGAC | ACCTCAGT | 2 | 0 | 19569836164 | 0.000 |
| 3 | dna_s737 | CATACCAC | AACAACCG | 1 | 0 | 17273185054 | 0.000 |
| 3 | dna_s737 | CATACCAC | AACAACCG | 2 | 0 | 17273185054 | 0.000 |
| 3 | dna_s738 | GAAGTTGG | CGAACAAC | 1 | 0 | 26571139159 | 0.000 |
| 3 | dna_s738 | GAAGTTGG | CGAACAAC | 2 | 0 | 26571139159 | 0.000 |
| 3 | dna_s739 | ATGACGTC | CTTCCTTC | 1 | 0 | 283010240 | 0.000 |
| 3 | dna_s739 | ATGACGTC | CTTCCTTC | 2 | 0 | 283010240 | 0.000 |
| 3 | dna_s740 | TTGGACGT | GAAGTGCT | 1 | 0 | 20450069977 | 0.000 |
| 3 | dna_s740 | TTGGACGT | GAAGTGCT | 2 | 0 | 20450069977 | 0.000 |
| 3 | dna_s741 | AGTGGATC | TCGATGAC | 1 | 0 | 14306936373 | 0.000 |
| 3 | dna_s741 | AGTGGATC | TCGATGAC | 2 | 0 | 14306936373 | 0.000 |
| 3 | dna_s742 | GATAGGCT | CAGTCACA | 1 | 0 | 28241116562 | 0.000 |
| 3 | dna_s742 | GATAGGCT | CAGTCACA | 2 | 0 | 28241116562 | 0.000 |
| 3 | dna_s743 | TGGTAGCT | AGGTGTTG | 1 | 0 | 1548918589 | 0.000 |
| 3 | dna_s743 | TGGTAGCT | AGGTGTTG | 2 | 0 | 1548918589 | 0.000 |
| 3 | dna_s744 | CGCAATCT | ACAGGCAT | 1 | 0 | 17348379430 | 0.000 |
| 3 | dna_s744 | CGCAATCT | ACAGGCAT | 2 | 0 | 17348379430 | 0.000 |
| 3 | dna_s745 | GATGTGTG | TAGCCATG | 1 | 0 | 21892313408 | 0.000 |
| 3 | dna_s745 | GATGTGTG | TAGCCATG | 2 | 0 | 21892313408 | 0.000 |
| 3 | dna_s746 | GATTGCTC | CACTTCAC | 1 | 0 | 16832291630 | 0.000 |
| 3 | dna_s746 | GATTGCTC | CACTTCAC | 2 | 0 | 16832291630 | 0.000 |
| 3 | dna_s747 | CGCTCTAT | TTGCAACG | 1 | 0 | 21146260611 | 0.000 |
| 3 | dna_s747 | CGCTCTAT | TTGCAACG | 2 | 0 | 21146260611 | 0.000 |
| 3 | dna_s748 | TATCGGTC | TACCGGAT | 1 | 0 | 20707932828 | 0.000 |
| 3 | dna_s748 | TATCGGTC | TACCGGAT | 2 | 0 | 20707932828 | 0.000 |
| 3 | dna_s749 | AACGTCTG | AATGACGC | 1 | 0 | 30748782924 | 0.000 |
| 3 | dna_s749 | AACGTCTG | AATGACGC | 2 | 0 | 30748782924 | 0.000 |
| 3 | dna_s750 | ACGTTCAG | AGTTGTGC | 1 | 0 | 26843462072 | 0.000 |
| 3 | dna_s750 | ACGTTCAG | AGTTGTGC | 2 | 0 | 26843462072 | 0.000 |
| 3 | dna_s751 | CAGTCCAA | CGGTAATC | 1 | 0 | 20675238006 | 0.000 |
| 3 | dna_s751 | CAGTCCAA | CGGTAATC | 2 | 0 | 20675238006 | 0.000 |
| 3 | dna_s752 | TTGCAGAC | ATCGTGGT | 1 | 0 | 19122770615 | 0.000 |
| 3 | dna_s752 | TTGCAGAC | ATCGTGGT | 2 | 0 | 19122770615 | 0.000 |
| 3 | dna_s753 | CAATGTGG | TCTTCGAC | 1 | 0 | 31626118745 | 0.000 |
| 3 | dna_s753 | CAATGTGG | TCTTCGAC | 2 | 0 | 31626118745 | 0.000 |
| 3 | dna_s754 | ACTCCATC | GATCAAGG | 1 | 0 | 15788916360 | 0.000 |
| 3 | dna_s754 | ACTCCATC | GATCAAGG | 2 | 0 | 15788916360 | 0.000 |
| 3 | dna_s755 | GTTGACCT | CAGTGCTT | 1 | 0 | 5274294553 | 0.000 |
| 3 | dna_s755 | GTTGACCT | CAGTGCTT | 2 | 0 | 5274294553 | 0.000 |
| 3 | dna_s756 | CGTGTGTA | CCAACGAA | 1 | 0 | 7448312372 | 0.000 |
| 3 | dna_s756 | CGTGTGTA | CCAACGAA | 2 | 0 | 7448312372 | 0.000 |
| 3 | dna_s757 | ACGACTTG | AACAGCGA | 1 | 0 | 7074742298 | 0.000 |
| 3 | dna_s757 | ACGACTTG | AACAGCGA | 2 | 0 | 7074742298 | 0.000 |
| 3 | dna_s758 | CACTAGCT | TCGGATTC | 1 | 0 | 3779731585 | 0.000 |
| 3 | dna_s758 | CACTAGCT | TCGGATTC | 2 | 0 | 3779731585 | 0.000 |
| 3 | dna_s759 | ACTAGGAG | TATGGCAC | 1 | 0 | 6364233089 | 0.000 |
| 3 | dna_s759 | ACTAGGAG | TATGGCAC | 2 | 0 | 6364233089 | 0.000 |
| 3 | dna_s760 | GTAGGAGT | GTCCTAAG | 1 | 0 | 5485963786 | 0.000 |
| 3 | dna_s760 | GTAGGAGT | GTCCTAAG | 2 | 0 | 5485963786 | 0.000 |
| 3 | dna_s761 | CCTGATTG | GCTCAGTT | 1 | 0 | 6732008085 | 0.000 |
| 3 | dna_s761 | CCTGATTG | GCTCAGTT | 2 | 0 | 6732008085 | 0.000 |
| 3 | dna_s762 | ATGCACGA | AGATCGTC | 1 | 0 | 4386461514 | 0.000 |
| 3 | dna_s762 | ATGCACGA | AGATCGTC | 2 | 0 | 4386461514 | 0.000 |
| 3 | dna_s763 | CGACGTTA | CTCTGGAT | 1 | 0 | 5696748008 | 0.000 |
| 3 | dna_s763 | CGACGTTA | CTCTGGAT | 2 | 0 | 5696748008 | 0.000 |
| 3 | dna_s764 | TACGCCTT | GCTACTCT | 1 | 0 | 4817707397 | 0.000 |
| 3 | dna_s764 | TACGCCTT | GCTACTCT | 2 | 0 | 4817707397 | 0.000 |
| 3 | dna_s765 | CCGTAAGA | AGAGTCCA | 1 | 0 | 3602362002 | 0.000 |
| 3 | dna_s765 | CCGTAAGA | AGAGTCCA | 2 | 0 | 3602362002 | 0.000 |
| 3 | dna_s766 | ATCACACG | GTAGCGTA | 1 | 0 | 5388866709 | 0.000 |
| 3 | dna_s766 | ATCACACG | GTAGCGTA | 2 | 0 | 5388866709 | 0.000 |
| 3 | dna_s767 | CACCTGTT | AGGATAGC | 1 | 0 | 4379671950 | 0.000 |
| 3 | dna_s767 | CACCTGTT | AGGATAGC | 2 | 0 | 4379671950 | 0.000 |
| 3 | dna_s768 | CTTCGACT | GATCTTGC | 1 | 0 | 4371639958 | 0.000 |
| 3 | dna_s768 | CTTCGACT | GATCTTGC | 2 | 0 | 4371639958 | 0.000 |
| 3 | dna_s769 | TGCTTCCA | CGATCGAT | 1 | 0 | 4509666189 | 0.000 |
| 3 | dna_s769 | TGCTTCCA | CGATCGAT | 2 | 0 | 4509666189 | 0.000 |
| 3 | dna_s770 | AGAACGAG | ATTAGCCG | 1 | 0 | 6644302302 | 0.000 |
| 3 | dna_s770 | AGAACGAG | ATTAGCCG | 2 | 0 | 6644302302 | 0.000 |
| 3 | dna_s771 | GTTCTCGT | TGTTCCGT | 1 | 0 | 4930405341 | 0.000 |
| 3 | dna_s771 | GTTCTCGT | TGTTCCGT | 2 | 0 | 4930405341 | 0.000 |
| 3 | dna_s772 | TCAGGCTT | ATCATGCG | 1 | 0 | 5548535317 | 0.000 |
| 3 | dna_s772 | TCAGGCTT | ATCATGCG | 2 | 0 | 5548535317 | 0.000 |
| 3 | dna_s773 | CCTTGTAG | CCTTGGAA | 1 | 0 | 7533065954 | 0.000 |
| 3 | dna_s773 | CCTTGTAG | CCTTGGAA | 2 | 0 | 7533065954 | 0.000 |
| 3 | dna_s774 | GAACATCG | TCGACAAG | 1 | 0 | 5451225934 | 0.000 |
| 3 | dna_s774 | GAACATCG | TCGACAAG | 2 | 0 | 5451225934 | 0.000 |
| 3 | dna_s775 | TAACCGGT | ATCGTCTC | 1 | 0 | 4393060969 | 0.000 |
| 3 | dna_s775 | TAACCGGT | ATCGTCTC | 2 | 0 | 4393060969 | 0.000 |
| 3 | dna_s776 | AACCGTTC | CTAGCTCA | 1 | 0 | 3772323827 | 0.000 |
| 3 | dna_s776 | AACCGTTC | CTAGCTCA | 2 | 0 | 3772323827 | 0.000 |
| 3 | dna_s777 | TGGTACAG | TCGAGAGT | 1 | 0 | 7036160439 | 0.000 |
| 3 | dna_s777 | TGGTACAG | TCGAGAGT | 2 | 0 | 7036160439 | 0.000 |
| 3 | dna_s778 | ATATGCGC | ACGATCAG | 1 | 0 | 2627702 | 0.000 |
| 3 | dna_s778 | ATATGCGC | ACGATCAG | 2 | 0 | 2627702 | 0.000 |
| 3 | Undetermined | 1 | 0 | 33627200492 | 0.000 | ||
| 3 | Undetermined | 2 | 0 | 33627200492 | 0.000 |
99 rows