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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0034/B2372Y3LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L003/Reports/Quality_Metrics.csv
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Workflow Run
cgp_rna_exp0034_73d51683
Published
Jun 07, 2026 11:38 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
3 dna_s731 GAGCAGTA TGAGCTGT 1 23140548566 21984121389 901804515396 38.97 0.95
3 dna_s731 GAGCAGTA TGAGCTGT 2 23140548566 21808881819 897967056816 38.80 0.94
3 dna_s732 AGTTCGTC ACTCGATC 1 12843899336 12032672662 496124368084 38.63 0.94
3 dna_s732 AGTTCGTC ACTCGATC 2 12843899336 11974584597 495465332964 38.58 0.93
3 dna_s733 TTGCGAAG AACACGCT 1 27822051094 26235170100 1079854138992 38.81 0.94
3 dna_s733 TTGCGAAG AACACGCT 2 27822051094 26070303628 1076261873044 38.68 0.94
3 dna_s734 ATCGCCAT TGCGTAAC 1 17224008280 16320005866 670296798337 38.92 0.95
3 dna_s734 ATCGCCAT TGCGTAAC 2 17224008280 16139544622 666063180976 38.67 0.94
3 dna_s735 TGGCATGT CGTCTTCA 1 18599828925 17604490946 723433401836 38.89 0.95
3 dna_s735 TGGCATGT CGTCTTCA 2 18599828925 17479907285 720549818183 38.74 0.94
3 dna_s736 CTGTTGAC ACCTCAGT 1 19569836164 18471978108 759826177422 38.83 0.94
3 dna_s736 CTGTTGAC ACCTCAGT 2 19569836164 18373626602 757703872922 38.72 0.94
3 dna_s737 CATACCAC AACAACCG 1 17273185054 16352801918 671624604422 38.88 0.95
3 dna_s737 CATACCAC AACAACCG 2 17273185054 16244649665 669442818509 38.76 0.94
3 dna_s738 GAAGTTGG CGAACAAC 1 26571139159 25277630623 1036707536839 39.02 0.95
3 dna_s738 GAAGTTGG CGAACAAC 2 26571139159 25048633125 1031554373568 38.82 0.94
3 dna_s739 ATGACGTC CTTCCTTC 1 283010240 260254505 10811820179 38.20 0.92
3 dna_s739 ATGACGTC CTTCCTTC 2 283010240 259023087 10809109593 38.19 0.92
3 dna_s740 TTGGACGT GAAGTGCT 1 20450069977 19441722730 797482209205 39.00 0.95
3 dna_s740 TTGGACGT GAAGTGCT 2 20450069977 19264898618 793401336194 38.80 0.94
3 dna_s741 AGTGGATC TCGATGAC 1 14306936373 13518887075 555689493656 38.84 0.94
3 dna_s741 AGTGGATC TCGATGAC 2 14306936373 13454502328 554402631496 38.75 0.94
3 dna_s742 GATAGGCT CAGTCACA 1 28241116562 26808442543 1099997905519 38.95 0.95
3 dna_s742 GATAGGCT CAGTCACA 2 28241116562 26656492902 1096714182318 38.83 0.94
3 dna_s743 TGGTAGCT AGGTGTTG 1 1548918589 1455410178 59943310320 38.70 0.94
3 dna_s743 TGGTAGCT AGGTGTTG 2 1548918589 1445411027 59774687174 38.59 0.93
3 dna_s744 CGCAATCT ACAGGCAT 1 17348379430 16451987721 675253831659 38.92 0.95
3 dna_s744 CGCAATCT ACAGGCAT 2 17348379430 16320203188 672386120881 38.76 0.94
3 dna_s745 GATGTGTG TAGCCATG 1 21892313408 20498027446 845530437862 38.62 0.94
3 dna_s745 GATGTGTG TAGCCATG 2 21892313408 20385355473 843651548247 38.54 0.93
3 dna_s746 GATTGCTC CACTTCAC 1 16832291630 15868968634 652883825692 38.79 0.94
3 dna_s746 GATTGCTC CACTTCAC 2 16832291630 15799508686 651673036315 38.72 0.94
3 dna_s747 CGCTCTAT TTGCAACG 1 21146260611 20193807074 827012361110 39.11 0.95
3 dna_s747 CGCTCTAT TTGCAACG 2 21146260611 19767413279 817270814459 38.65 0.93
3 dna_s748 TATCGGTC TACCGGAT 1 20707932828 19721304110 808449661823 39.04 0.95
3 dna_s748 TATCGGTC TACCGGAT 2 20707932828 19441774372 802111759117 38.73 0.94
3 dna_s749 AACGTCTG AATGACGC 1 30748782924 29296302268 1200486671899 39.04 0.95
3 dna_s749 AACGTCTG AATGACGC 2 30748782924 28826560875 1190251982859 38.71 0.94
3 dna_s750 ACGTTCAG AGTTGTGC 1 26843462072 25559140522 1048052369197 39.04 0.95
3 dna_s750 ACGTTCAG AGTTGTGC 2 26843462072 25097004283 1037793041239 38.66 0.93
3 dna_s751 CAGTCCAA CGGTAATC 1 20675238006 19661800306 806710627630 39.02 0.95
3 dna_s751 CAGTCCAA CGGTAATC 2 20675238006 19435579930 801369043582 38.76 0.94
3 dna_s752 TTGCAGAC ATCGTGGT 1 19122770615 18235219474 747159432205 39.07 0.95
3 dna_s752 TTGCAGAC ATCGTGGT 2 19122770615 17953626333 740478074649 38.72 0.94
3 dna_s753 CAATGTGG TCTTCGAC 1 31626118745 30134964998 1234901827196 39.05 0.95
3 dna_s753 CAATGTGG TCTTCGAC 2 31626118745 29855865643 1228640368549 38.85 0.94
3 dna_s754 ACTCCATC GATCAAGG 1 15788916360 15046384814 616654204142 39.06 0.95
3 dna_s754 ACTCCATC GATCAAGG 2 15788916360 14741375980 609898116517 38.63 0.93
3 dna_s755 GTTGACCT CAGTGCTT 1 5274294553 5026819783 205934271253 39.04 0.95
3 dna_s755 GTTGACCT CAGTGCTT 2 5274294553 4977221221 204840351022 38.84 0.94
3 dna_s756 CGTGTGTA CCAACGAA 1 7448312372 7080919662 290366217141 38.98 0.95
3 dna_s756 CGTGTGTA CCAACGAA 2 7448312372 7026672190 289177683637 38.82 0.94
3 dna_s757 ACGACTTG AACAGCGA 1 7074742298 6740750145 276169160088 39.04 0.95
3 dna_s757 ACGACTTG AACAGCGA 2 7074742298 6676654383 274760327022 38.84 0.94
3 dna_s758 CACTAGCT TCGGATTC 1 3779731585 3601992045 147564545148 39.04 0.95
3 dna_s758 CACTAGCT TCGGATTC 2 3779731585 3566910289 146779102669 38.83 0.94
3 dna_s759 ACTAGGAG TATGGCAC 1 6364233089 6074193909 248737601328 39.08 0.95
3 dna_s759 ACTAGGAG TATGGCAC 2 6364233089 6008351282 247240305266 38.85 0.94
3 dna_s760 GTAGGAGT GTCCTAAG 1 5485963786 5232615479 214315521083 39.07 0.95
3 dna_s760 GTAGGAGT GTCCTAAG 2 5485963786 5195678072 213453820823 38.91 0.95
3 dna_s761 CCTGATTG GCTCAGTT 1 6732008085 6415110050 262774698263 39.03 0.95
3 dna_s761 CCTGATTG GCTCAGTT 2 6732008085 6369698030 261807142097 38.89 0.95
3 dna_s762 ATGCACGA AGATCGTC 1 4386461514 4179951084 171321294234 39.06 0.95
3 dna_s762 ATGCACGA AGATCGTC 2 4386461514 4121327126 169958297024 38.75 0.94
3 dna_s763 CGACGTTA CTCTGGAT 1 5696748008 5422890556 222271391467 39.02 0.95
3 dna_s763 CGACGTTA CTCTGGAT 2 5696748008 5375383194 221242412433 38.84 0.94
3 dna_s764 TACGCCTT GCTACTCT 1 4817707397 4582640987 187866289760 38.99 0.95
3 dna_s764 TACGCCTT GCTACTCT 2 4817707397 4551778527 187191933249 38.85 0.94
3 dna_s765 CCGTAAGA AGAGTCCA 1 3602362002 3430374988 140577699085 39.02 0.95
3 dna_s765 CCGTAAGA AGAGTCCA 2 3602362002 3379444601 139255181078 38.66 0.94
3 dna_s766 ATCACACG GTAGCGTA 1 5388866709 5128585067 210270941903 39.02 0.95
3 dna_s766 ATCACACG GTAGCGTA 2 5388866709 5061598308 208549825674 38.70 0.94
3 dna_s767 CACCTGTT AGGATAGC 1 4379671950 4181683226 171155156297 39.08 0.95
3 dna_s767 CACCTGTT AGGATAGC 2 4379671950 4121731148 169798257839 38.77 0.94
3 dna_s768 CTTCGACT GATCTTGC 1 4371639958 4167635921 170709922304 39.05 0.95
3 dna_s768 CTTCGACT GATCTTGC 2 4371639958 4123549601 169735738670 38.83 0.94
3 dna_s769 TGCTTCCA CGATCGAT 1 4509666189 4282337740 175755470152 38.97 0.95
3 dna_s769 TGCTTCCA CGATCGAT 2 4509666189 4247597833 174931717822 38.79 0.94
3 dna_s770 AGAACGAG ATTAGCCG 1 6644302302 6322788287 259317213641 39.03 0.95
3 dna_s770 AGAACGAG ATTAGCCG 2 6644302302 6239963132 257442704471 38.75 0.94
3 dna_s771 GTTCTCGT TGTTCCGT 1 4930405341 4702941419 192653195399 39.07 0.95
3 dna_s771 GTTCTCGT TGTTCCGT 2 4930405341 4650412054 191445396475 38.83 0.94
3 dna_s772 TCAGGCTT ATCATGCG 1 5548535317 5283295353 216534427326 39.03 0.95
3 dna_s772 TCAGGCTT ATCATGCG 2 5548535317 5227135111 215274636940 38.80 0.94
3 dna_s773 CCTTGTAG CCTTGGAA 1 7533065954 7185534862 294244377376 39.06 0.95
3 dna_s773 CCTTGTAG CCTTGGAA 2 7533065954 7119735390 292811748042 38.87 0.95
3 dna_s774 GAACATCG TCGACAAG 1 5451225934 5179659273 212557699590 38.99 0.95
3 dna_s774 GAACATCG TCGACAAG 2 5451225934 5141380106 211654839419 38.83 0.94
3 dna_s775 TAACCGGT ATCGTCTC 1 4393060969 4189320238 171609694237 39.06 0.95
3 dna_s775 TAACCGGT ATCGTCTC 2 4393060969 4135424284 170364173026 38.78 0.94
3 dna_s776 AACCGTTC CTAGCTCA 1 3772323827 3591749715 147225191001 39.03 0.95
3 dna_s776 AACCGTTC CTAGCTCA 2 3772323827 3558684959 146460527651 38.83 0.94
3 dna_s777 TGGTACAG TCGAGAGT 1 7036160439 6698447063 274555721402 39.02 0.95
3 dna_s777 TGGTACAG TCGAGAGT 2 7036160439 6648190332 273440113560 38.86 0.94
3 dna_s778 ATATGCGC ACGATCAG 1 2627702 2430843 101037219 38.45 0.93
3 dna_s778 ATATGCGC ACGATCAG 2 2627702 1970008 89844289 34.19 0.75
3 Undetermined 1 33627200492 27728676539 1213551089552 36.09 0.82
3 Undetermined 2 33627200492 28043466992 1214399789435 36.11 0.83
99 rows