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Filename
Demultiplex_Stats_aggregate.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0034/B2372Y3LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/reports/Demultiplex_Stats_aggregate.csv
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9.2 KB
Workflow Run
cgp_rna_exp0034_73d51683
Published
Jun 07, 2026 11:47 PM

Content

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SampleID Lanes Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
659_bW9_T1_TRNA_1_B2372Y3LT4_1 8 GACGATCT-TCGTGCAT 200217332 196502903 3714429 0 0.0061 0.9814 0.0186 0.0
659_bdp_T1_TRNA_1_B2372Y3LT4_1 8 CTTGTCGA-CGATGTTC 169301685 166393077 2908608 0 0.0051 0.9828 0.0172 0.0
659_beZ_T1_TRNA_2_B2372Y3LT4_1 8 TGGACTCT-TCTTACGG 20805724 20390882 414842 0 0.0006 0.9801 0.0199 0.0
659_bld_T1_TRNA_1_B2372Y3LT4_1 8 ACGGAACA-ACGAGAAC 144136703 141031342 3105361 0 0.0044 0.9785 0.0215 0.0
659_bqK_T1_TRNA_1_B2372Y3LT4_1 8 AGAGTAGC-AAGGCGTA 131917517 129070785 2846732 0 0.004 0.9784 0.0216 0.0
659_cX2_T1_TRNA_1_B2372Y3LT4_1 8 CTGATCGT-GCGCATAT 78630038 76981173 1648865 0 0.0024 0.979 0.021 0.0
659_dDe_T1_TRNA_1_B2372Y3LT4_1 8 ATCCAGAG-TAACGTCG 147838523 144795256 3043267 0 0.0045 0.9794 0.0206 0.0
659_db9_T1_TRNA_1_B2372Y3LT4_1 8 CGCATGAT-AAGCCTGA 220047060 215703990 4343070 0 0.0067 0.9803 0.0197 0.0
659_e1p_T1_TRNA_1_B2372Y3LT4_1 8 AACTGAGC-CAATCAGG 203515105 200146233 3368872 0 0.0062 0.9834 0.0166 0.0
659_epJ_T1_TRNA_1_B2372Y3LT4_1 8 GCAAGATC-AGTCGAAG 156493084 152815638 3677446 0 0.0047 0.9765 0.0235 0.0
659_exc_T1_TRNA_1_B2372Y3LT4_1 8 CTTAGGAC-ACTCCTAC 152879574 149891129 2988445 0 0.0046 0.9805 0.0195 0.0
659_v2_T1_TRNA_1_B2372Y3LT4_1 8 ACTCTCGA-CTGTACCA 172103977 169364528 2739449 0 0.0052 0.9841 0.0159 0.0
659_w0_T1_TRNA_1_B2372Y3LT4_1 8 GAGACGAT-ACCGGTTA 130419316 127174979 3244337 0 0.0039 0.9751 0.0249 0.0
659_w9_T1_TRNA_1_B2372Y3LT4_1 8 TGAGCTAG-GAACGGTT 171110604 166302540 4808064 0 0.0052 0.9719 0.0281 0.0
659_w_T1_TRNA_1_B2372Y3LT4_1 8 TACGCTAC-CGTGTGAT 102677201 99359073 3318128 0 0.0031 0.9677 0.0323 0.0
659_x2_T1_TRNA_1_B2372Y3LT4_1 8 GCTATCCT-AACAGGTG 148655917 146026811 2629106 0 0.0045 0.9823 0.0177 0.0
659_yF_T1_TRNA_1_B2372Y3LT4_1 8 TTCCAAGG-CTACAAGG 185107447 181954885 3152562 0 0.0056 0.983 0.017 0.0
659_yV_T1_TRNA_1_B2372Y3LT4_1 8 GTGCCATA-CTCCTAGT 124951656 121516149 3435507 0 0.0038 0.9725 0.0275 0.0
659_z2_T1_TRNA_1_B2372Y3LT4_1 8 CGGCTAAT-CTCGTTCT 155595624 153342130 2253494 0 0.0047 0.9855 0.0145 0.0
659_zC_T1_TRNA_1_B2372Y3LT4_1 8 ATCGATCG-TGGAAGCA 136877361 128673608 8203753 0 0.0041 0.9401 0.0599 0.0
FFPE_HD789_01_RNA_0012_B2372Y3LT4_1 8 TTCGTTGG-TACACACG 278048920 273357537 4691383 0 0.0084 0.9831 0.0169 0.0
FFPE_HD789_01_RNA_0012_B2372Y3LT4_2 8 AAGCACTG-AGGTCAAC 266923943 261771153 5152790 0 0.0081 0.9807 0.0193 0.0
FFPE_V4_0001_RNA_0001_B2372Y3LT4_1 8 GAATCCGA-AGCTAGTG 160801338 157501167 3300171 0 0.0049 0.9795 0.0205 0.0
FFPE_V4_0001_RNA_0001_B2372Y3LT4_2 8 TCGCTGTT-CAAGTCGT 219386610 215352355 4034255 0 0.0066 0.9816 0.0184 0.0
Undetermined 1,2,3,4,5,6,7,8 1693362685 1693362685 0 0 0.0512 1.0 0.0 0.0
dna_s707 5,6,7 CTGATCGT-GCGCATAT 351826052 343532387 8293665 0 0.0106 0.9764 0.0236 0.0
dna_s708 5,6,7 CTTGTCGA-CGATGTTC 509197049 500522760 8674289 0 0.0154 0.983 0.017 0.0
dna_s709 5,6,7 ACGGAACA-ACGAGAAC 410524206 402110892 8413314 0 0.0124 0.9795 0.0205 0.0
dna_s710 5,6,7 GCAAGATC-AGTCGAAG 363481817 353762267 9719550 0 0.011 0.9733 0.0267 0.0
dna_s711 5,6,7 GCTATCCT-AACAGGTG 401928434 394063027 7865407 0 0.0122 0.9804 0.0196 0.0
dna_s712 5,6,7 ATCCAGAG-TAACGTCG 660022325 645467039 14555286 0 0.02 0.9779 0.0221 0.0
dna_s713 5,6,7 AACTGAGC-CAATCAGG 405688686 398321628 7367058 0 0.0123 0.9818 0.0182 0.0
dna_s714 5,6,7 GAATCCGA-AGCTAGTG 369513105 361815143 7697962 0 0.0112 0.9792 0.0208 0.0
dna_s715 5,6,7 TTCGTTGG-TACACACG 631050638 618566292 12484346 0 0.0191 0.9802 0.0198 0.0
dna_s716 5,6,7 GTCGAAGA-CCACATTG 383597226 377074257 6522969 0 0.0116 0.983 0.017 0.0
dna_s717 5,6,7 ACCACGAT-GTCTGCAA 492312887 481197278 11115609 0 0.0149 0.9774 0.0226 0.0
dna_s718 5,6,7 GCACAACT-CTGAACGT 459149870 450844756 8305114 0 0.0139 0.9819 0.0181 0.0
dna_s719 5,6,7 ATCCGGTA-GACCGATA 551717887 542841369 8876518 0 0.0167 0.9839 0.0161 0.0
dna_s720 5,6,7 CGTTGCAA-ATAGAGCG 395770890 388247397 7523493 0 0.012 0.981 0.019 0.0
dna_s721 5,6,7 CATGGCTA-CACACATC 625954335 616357246 9597089 0 0.0189 0.9847 0.0153 0.0
dna_s722 5,6,7 ATGCCTGT-AGATTGCG 448147282 438945905 9201377 0 0.0136 0.9795 0.0205 0.0
dna_s723 5,6,7 CAACACCT-AGCTACCA 406927178 396058571 10868607 0 0.0123 0.9733 0.0267 0.0
dna_s724 5,6,7 GTCATCGA-GATCCACT 355043579 348823254 6220325 0 0.0107 0.9825 0.0175 0.0
dna_s725 5,6,7 GAAGGAAG-GACGTCAT 616332088 604348363 11983725 0 0.0187 0.9806 0.0194 0.0
dna_s726 5,6,7 GTTGTTCG-CCAACTTC 624177352 614560504 9616848 0 0.0189 0.9846 0.0154 0.0
dna_s727 5,6,7 CGGTTGTT-GTGGTATG 523018348 514813121 8205227 0 0.0158 0.9843 0.0157 0.0
dna_s728 5,6,7 GTTACGCA-ATGGCGAT 432500075 424942678 7557397 0 0.0131 0.9825 0.0175 0.0
dna_s729 5,6,7 AGCGTGTT-CTTCGCAA 728271466 714821316 13450150 0 0.022 0.9815 0.0185 0.0
dna_s730 5,6,7 GATCGAGT-GACGAACT 558048172 549007978 9040194 0 0.0169 0.9838 0.0162 0.0
dna_s731 1,2,3,4 GAGCAGTA-TGAGCTGT 613762328 596014183 17748145 0 0.0186 0.9711 0.0289 0.0
dna_s732 1,2,3,4 AGTTCGTC-ACTCGATC 340201032 331522353 8678679 0 0.0103 0.9745 0.0255 0.0
dna_s733 1,2,3,4 TTGCGAAG-AACACGCT 738832057 719458564 19373493 0 0.0224 0.9738 0.0262 0.0
dna_s734 1,2,3,4 ATCGCCAT-TGCGTAAC 456526539 442678012 13848527 0 0.0138 0.9697 0.0303 0.0
dna_s735 1,2,3,4 TGGCATGT-CGTCTTCA 491854451 478498478 13355973 0 0.0149 0.9728 0.0272 0.0
dna_s736 1,2,3,4 CTGTTGAC-ACCTCAGT 518790973 504813040 13977933 0 0.0157 0.9731 0.0269 0.0
dna_s737 1,2,3,4 CATACCAC-AACAACCG 455252347 441405542 13846805 0 0.0138 0.9696 0.0304 0.0
dna_s738 1,2,3,4 GAAGTTGG-CGAACAAC 705421994 684736968 20685026 0 0.0213 0.9707 0.0293 0.0
dna_s739 1,2,3,4 ATGACGTC-CTTCCTTC 7479489 7275797 203692 0 0.0002 0.9728 0.0272 0.0
dna_s740 1,2,3,4 TTGGACGT-GAAGTGCT 541732306 527308904 14423402 0 0.0164 0.9734 0.0266 0.0
dna_s741 1,2,3,4 AGTGGATC-TCGATGAC 377194017 366864739 10329278 0 0.0114 0.9726 0.0274 0.0
dna_s742 1,2,3,4 GATAGGCT-CAGTCACA 748316632 729554381 18762251 0 0.0226 0.9749 0.0251 0.0
dna_s743 1,2,3,4 TGGTAGCT-AGGTGTTG 41147996 39973992 1174004 0 0.0012 0.9715 0.0285 0.0
dna_s744 1,2,3,4 CGCAATCT-ACAGGCAT 460498469 446613486 13884983 0 0.0139 0.9698 0.0302 0.0
dna_s745 1,2,3,4 GATGTGTG-TAGCCATG 580172331 562710056 17462275 0 0.0176 0.9699 0.0301 0.0
dna_s746 1,2,3,4 GATTGCTC-CACTTCAC 446246219 433524467 12721752 0 0.0135 0.9715 0.0285 0.0
dna_s747 1,2,3,4 CGCTCTAT-TTGCAACG 561796117 541691977 20104140 0 0.017 0.9642 0.0358 0.0
dna_s748 1,2,3,4 TATCGGTC-TACCGGAT 547674554 532989485 14685069 0 0.0166 0.9732 0.0268 0.0
dna_s749 1,2,3,4 AACGTCTG-AATGACGC 815805914 790876596 24929318 0 0.0247 0.9694 0.0306 0.0
dna_s750 1,2,3,4 ACGTTCAG-AGTTGTGC 710092740 689724232 20368508 0 0.0215 0.9713 0.0287 0.0
dna_s751 1,2,3,4 CAGTCCAA-CGGTAATC 547801373 529558990 18242383 0 0.0166 0.9667 0.0333 0.0
dna_s752 1,2,3,4 TTGCAGAC-ATCGTGGT 506588045 492950974 13637071 0 0.0153 0.9731 0.0269 0.0
dna_s753 1,2,3,4 CAATGTGG-TCTTCGAC 838806359 817594659 21211700 0 0.0254 0.9747 0.0253 0.0
dna_s754 1,2,3,4 ACTCCATC-GATCAAGG 416367437 404357884 12009553 0 0.0126 0.9712 0.0288 0.0
dna_s755 1,2,3,4 GTTGACCT-CAGTGCTT 139513419 135324983 4188436 0 0.0042 0.97 0.03 0.0
dna_s756 1,2,3,4 CGTGTGTA-CCAACGAA 197488601 192190365 5298236 0 0.006 0.9732 0.0268 0.0
dna_s757 1,2,3,4 ACGACTTG-AACAGCGA 187383647 181592167 5791480 0 0.0057 0.9691 0.0309 0.0
dna_s758 1,2,3,4 CACTAGCT-TCGGATTC 100021963 97166916 2855047 0 0.003 0.9715 0.0285 0.0
dna_s759 1,2,3,4 ACTAGGAG-TATGGCAC 168559142 162858324 5700818 0 0.0051 0.9662 0.0338 0.0
dna_s760 1,2,3,4 GTAGGAGT-GTCCTAAG 144970483 140742523 4227960 0 0.0044 0.9708 0.0292 0.0
dna_s761 1,2,3,4 CCTGATTG-GCTCAGTT 178426911 171663505 6763406 0 0.0054 0.9621 0.0379 0.0
dna_s762 1,2,3,4 ATGCACGA-AGATCGTC 117187222 113361047 3826175 0 0.0035 0.9673 0.0327 0.0
dna_s763 1,2,3,4 CGACGTTA-CTCTGGAT 151043735 145571277 5472458 0 0.0046 0.9638 0.0362 0.0
dna_s764 1,2,3,4 TACGCCTT-GCTACTCT 127559649 123586493 3973156 0 0.0039 0.9689 0.0311 0.0
dna_s765 1,2,3,4 CCGTAAGA-AGAGTCCA 95341271 91826979 3514292 0 0.0029 0.9631 0.0369 0.0
dna_s766 1,2,3,4 ATCACACG-GTAGCGTA 142964106 136390069 6574037 0 0.0043 0.954 0.046 0.0
dna_s767 1,2,3,4 CACCTGTT-AGGATAGC 116284408 112137442 4146966 0 0.0035 0.9643 0.0357 0.0
dna_s768 1,2,3,4 CTTCGACT-GATCTTGC 115943713 112478596 3465117 0 0.0035 0.9701 0.0299 0.0
dna_s769 1,2,3,4 TGCTTCCA-CGATCGAT 119828251 115810461 4017790 0 0.0036 0.9665 0.0335 0.0
dna_s770 1,2,3,4 AGAACGAG-ATTAGCCG 176085957 161289129 14796828 0 0.0053 0.916 0.084 0.0
dna_s771 1,2,3,4 GTTCTCGT-TGTTCCGT 130658829 127251743 3407086 0 0.004 0.9739 0.0261 0.0
dna_s772 1,2,3,4 TCAGGCTT-ATCATGCG 147484130 143280107 4204023 0 0.0045 0.9715 0.0285 0.0
dna_s773 1,2,3,4 CCTTGTAG-CCTTGGAA 199762770 193571246 6191524 0 0.006 0.969 0.031 0.0
dna_s774 1,2,3,4 GAACATCG-TCGACAAG 144314502 139190078 5124424 0 0.0044 0.9645 0.0355 0.0
dna_s775 1,2,3,4 TAACCGGT-ATCGTCTC 116173625 112270043 3903582 0 0.0035 0.9664 0.0336 0.0
dna_s776 1,2,3,4 AACCGTTC-CTAGCTCA 99471973 96294405 3177568 0 0.003 0.9681 0.0319 0.0
dna_s777 1,2,3,4 TGGTACAG-TCGAGAGT 186334809 180978236 5356573 0 0.0056 0.9713 0.0287 0.0
dna_s778 1,2,3,4 ATATGCGC-ACGATCAG 70035 68005 2030 0 0.0 0.971 0.029 0.0
98 rows