#==================================================
#All numbers are READ count
#==================================================

Total records:                          93311597

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        11271708
Unmapped reads:                         1429747
mapq < mapq_cut (non-unique):           4040351

mapq >= mapq_cut (unique):              76569791
Read-1:                                 38282678
Read-2:                                 38287113
Reads map to '+':                       38284666
Reads map to '-':                       38285125
Non-splice reads:                       76439670
Splice reads:                           130121
Reads mapped in proper pairs:           76329340
Proper-paired reads map to different chrom:0