AIH curated blacklist: matched 2 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 51
Pass (FILTER=PASS): 1 (2.0%)
Fail (FILTER=FAIL): 50 (98.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 2
All 2 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 19
confidence_below_min(low<high): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 1
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 1
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 1
Breakdown by confidence:
high: 1 pass, 0 fail (total: 1)
low: 0 pass, 26 fail (total: 26)
medium: 0 pass, 24 fail (total: 24)
Arriba filter: 51 rows -> 1 PASS; wrote dna_s776.arriba.fusions.filtered.tsv and dna_s776.arriba.fusions.filtered_pass_only.tsv
Summary written to: dna_s776.arriba.fusions.filter_summary.txt