Started job on | Jun 08 07:18:35
Started mapping on | Jun 08 07:20:42
Finished on | Jun 08 07:39:01
Mapping speed, Million of reads per hour | 380.12
Number of input reads | 116041077
Average input read length | 290
UNIQUE READS:
Uniquely mapped reads number | 109923777
Uniquely mapped reads % | 94.73%
Average mapped length | 290.65
Number of splices: Total | 367116
Number of splices: Annotated (sjdb) | 209166
Number of splices: GT/AG | 312317
Number of splices: GC/AG | 42604
Number of splices: AT/AC | 2170
Number of splices: Non-canonical | 10025
Mismatch rate per base, % | 0.21%
Deletion rate per base | 0.01%
Deletion average length | 1.73
Insertion rate per base | 0.01%
Insertion average length | 2.23
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 3899750
% of reads mapped to multiple loci | 3.36%
Number of reads mapped to too many loci | 228331
% of reads mapped to too many loci | 0.20%
UNMAPPED READS:
Number of reads unmapped: too many mismatches | 180813
% of reads unmapped: too many mismatches | 0.16%
Number of reads unmapped: too short | 1163118
% of reads unmapped: too short | 1.00%
Number of reads unmapped: other | 309841
% of reads unmapped: other | 0.27%
CHIMERIC READS:
Number of chimeric reads | 1151036
% of chimeric reads | 0.99%