Started job on | Jun 08 07:23:28
Started mapping on | Jun 08 07:25:38
Finished on | Jun 08 07:55:50
Mapping speed, Million of reads per hour | 393.28
Number of input reads | 197949861
Average input read length | 286
UNIQUE READS:
Uniquely mapped reads number | 187248661
Uniquely mapped reads % | 94.59%
Average mapped length | 286.51
Number of splices: Total | 616017
Number of splices: Annotated (sjdb) | 367942
Number of splices: GT/AG | 531903
Number of splices: GC/AG | 63345
Number of splices: AT/AC | 3295
Number of splices: Non-canonical | 17474
Mismatch rate per base, % | 0.20%
Deletion rate per base | 0.01%
Deletion average length | 1.63
Insertion rate per base | 0.01%
Insertion average length | 2.25
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 7092390
% of reads mapped to multiple loci | 3.58%
Number of reads mapped to too many loci | 451657
% of reads mapped to too many loci | 0.23%
UNMAPPED READS:
Number of reads unmapped: too many mismatches | 306753
% of reads unmapped: too many mismatches | 0.15%
Number of reads unmapped: too short | 1707955
% of reads unmapped: too short | 0.86%
Number of reads unmapped: other | 609898
% of reads unmapped: other | 0.31%
CHIMERIC READS:
Number of chimeric reads | 1695158
% of chimeric reads | 0.86%