.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (659_cX2_T1_TRNA_1_B2372Y3LT4_1)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/67f1447218d79a7eb7b6c7566fa76f/.command.err
Size: 67.6 KB
Task: NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (659_cX2_T1_TRNA_1_B2372Y3LT4_1)
Attempt
Content

-ctat genome lib [/tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.W6PcoIXGwL/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary
-sample contains 77954342 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir  -J /tmp/nxf.W6PcoIXGwL/659_cX2_T1_TRNA_1_B2372Y3LT4_1.Chimeric.out.junction  -O /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.W6PcoIXGwL/659_cX2_T1_TRNA_1_B2372Y3LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[520000], rate=50649.35/min -building interval tree based on /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[520000], rate=49056.60/min -building interval tree based on /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[510000], rate=46717.56/min -building interval tree based on /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[520000], rate=37726.72/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 3000000.00 reads per min processed...  
 2400000.00 reads per min processed...  
 2250000.00 reads per min processed...  
 2400000.00 reads per min processed...  
 2307692.31 reads per min processed...  
 2250000.00 reads per min processed...  
 2210526.32 reads per min processed...  
 2285714.29 reads per min processed...  
 2250000.00 reads per min processed...  
 2307692.31 reads per min processed...  
 2357142.86 reads per min processed...  
 2400000.00 reads per min processed...  
 2363636.36 reads per min processed...  
 2400000.00 reads per min processed...  
 2368421.05 reads per min processed...  
 2400000.00 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.W6PcoIXGwL/659_cX2_T1_TRNA_1_B2372Y3LT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -497398.767051
EM: Round [1] log likelihood: -497115.728068
EM: Round [2] log likelihood: -497075.089501
EM: Round [3] log likelihood: -497057.391363
EM: Round [4] log likelihood: -497047.481787
EM: Round [5] log likelihood: -497041.183950
EM: Round [6] log likelihood: -497036.859436
EM: Round [7] log likelihood: -497033.732195
EM: Round [8] log likelihood: -497031.385243
EM: Round [9] log likelihood: -497029.573784
EM: Round [10] log likelihood: -497028.144311
EM: Round [11] log likelihood: -497026.995477
EM: Round [12] log likelihood: -497026.057602
EM: Round [13] log likelihood: -497025.281218
EM: Round [14] log likelihood: -497024.630326
EM: Round [15] log likelihood: -497024.078230
EM: Round [16] log likelihood: -497023.604837
EM: Round [17] log likelihood: -497023.194853
EM: Round [18] log likelihood: -497022.836515
EM: Round [19] log likelihood: -497022.520699
EM: Round [20] log likelihood: -497022.240262
EM: Round [21] log likelihood: -497021.989561
EM: Round [22] log likelihood: -497021.764097
EM: Round [23] log likelihood: -497021.560245
EM: Round [24] log likelihood: -497021.375057
EM: Round [25] log likelihood: -497021.206111
EM: Round [26] log likelihood: -497021.051399
EM: Round [27] log likelihood: -497020.909239
EM: Round [28] log likelihood: -497020.778211
EM: Round [29] log likelihood: -497020.657106
EM: Round [30] log likelihood: -497020.544887
EM: Round [31] log likelihood: -497020.440660
EM: Round [32] log likelihood: -497020.343647
EM: Round [33] log likelihood: -497020.253170
EM: Round [34] log likelihood: -497020.168633
EM: Round [35] log likelihood: -497020.089511
EM: Round [36] log likelihood: -497020.015337
EM: Round [37] log likelihood: -497019.945699
EM: Round [38] log likelihood: -497019.880227
EM: Round [39] log likelihood: -497019.818592
EM: Round [40] log likelihood: -497019.760495
EM: Round [41] log likelihood: -497019.705670
EM: Round [42] log likelihood: -497019.653876
EM: Round [43] log likelihood: -497019.604894
EM: Round [44] log likelihood: -497019.558525
EM: Round [45] log likelihood: -497019.514588
EM: Round [46] log likelihood: -497019.472920
EM: Round [47] log likelihood: -497019.433370
EM: Round [48] log likelihood: -497019.395800
EM: Round [49] log likelihood: -497019.360084
EM: Round [50] log likelihood: -497019.326105
EM: Round [51] log likelihood: -497019.293756
EM: Round [52] log likelihood: -497019.262940
EM: Round [53] log likelihood: -497019.233564
EM: Round [54] log likelihood: -497019.205545
EM: Round [55] log likelihood: -497019.178805
EM: Round [56] log likelihood: -497019.153270
EM: Round [57] log likelihood: -497019.128875
EM: Round [58] log likelihood: -497019.105556
EM: Round [59] log likelihood: -497019.083254
EM: Round [60] log likelihood: -497019.061916
EM: Round [61] log likelihood: -497019.041491
EM: Round [62] log likelihood: -497019.021932
EM: Round [63] log likelihood: -497019.003193
EM: Round [64] log likelihood: -497018.985234
EM: Round [65] log likelihood: -497018.968015
EM: Round [66] log likelihood: -497018.951501
EM: Round [67] log likelihood: -497018.935655
EM: Round [68] log likelihood: -497018.920448
EM: Round [69] log likelihood: -497018.905846
EM: Round [70] log likelihood: -497018.891824
EM: Round [71] log likelihood: -497018.878352
EM: Round [72] log likelihood: -497018.865406
EM: Round [73] log likelihood: -497018.852963
EM: Round [74] log likelihood: -497018.840998
EM: Round [75] log likelihood: -497018.829491
EM: Round [76] log likelihood: -497018.818422
EM: Round [77] log likelihood: -497018.807770
EM: Round [78] log likelihood: -497018.797519
EM: Round [79] log likelihood: -497018.787650
EM: Round [80] log likelihood: -497018.778148
EM: Round [81] log likelihood: -497018.768997
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EM: Round [83] log likelihood: -497018.751689
EM: Round [84] log likelihood: -497018.743504
EM: Round [85] log likelihood: -497018.735616
EM: Round [86] log likelihood: -497018.728012
EM: Round [87] log likelihood: -497018.720680
EM: Round [88] log likelihood: -497018.713611
EM: Round [89] log likelihood: -497018.706792
EM: Round [90] log likelihood: -497018.700214
EM: Round [91] log likelihood: -497018.693869
EM: Round [92] log likelihood: -497018.687746
EM: Round [93] log likelihood: -497018.681837
EM: Round [94] log likelihood: -497018.676134
EM: Round [95] log likelihood: -497018.670629
EM: Round [96] log likelihood: -497018.665314
EM: Round [97] log likelihood: -497018.660183
EM: Round [98] log likelihood: -497018.655227
EM: Round [99] log likelihood: -497018.650442
EM: Round [100] log likelihood: -497018.645820
EM: Round [101] log likelihood: -497018.641355
EM: Round [102] log likelihood: -497018.637041
EM: Round [103] log likelihood: -497018.632873
EM: Round [104] log likelihood: -497018.628846
EM: Round [105] log likelihood: -497018.624955
EM: Round [106] log likelihood: -497018.621194
EM: Round [107] log likelihood: -497018.617559
EM: Round [108] log likelihood: -497018.614045
EM: Round [109] log likelihood: -497018.610648
EM: Round [110] log likelihood: -497018.607364
EM: Round [111] log likelihood: -497018.604188
EM: Round [112] log likelihood: -497018.601118
EM: Round [113] log likelihood: -497018.598149
EM: Round [114] log likelihood: -497018.595278
EM: Round [115] log likelihood: -497018.592501
EM: Round [116] log likelihood: -497018.589815
EM: Round [117] log likelihood: -497018.587216
EM: Round [118] log likelihood: -497018.584703
EM: Round [119] log likelihood: -497018.582272
EM: Round [120] log likelihood: -497018.579919
EM: Round [121] log likelihood: -497018.577643
EM: Round [122] log likelihood: -497018.575441
EM: Round [123] log likelihood: -497018.573310
EM: Round [124] log likelihood: -497018.571248
EM: Round [125] log likelihood: -497018.569252
EM: Round [126] log likelihood: -497018.567320
EM: Round [127] log likelihood: -497018.565451
EM: Round [128] log likelihood: -497018.563642
EM: Round [129] log likelihood: -497018.561890
EM: Round [130] log likelihood: -497018.560195
EM: Round [131] log likelihood: -497018.558553
EM: Round [132] log likelihood: -497018.556964
EM: Round [133] log likelihood: -497018.555426
EM: Round [134] log likelihood: -497018.553937
EM: Round [135] log likelihood: -497018.552495
EM: Round [136] log likelihood: -497018.551098
EM: Round [137] log likelihood: -497018.549746
EM: Round [138] log likelihood: -497018.548437
EM: Round [139] log likelihood: -497018.547169
EM: Round [140] log likelihood: -497018.545941
EM: Round [141] log likelihood: -497018.544752
EM: Round [142] log likelihood: -497018.543600
EM: Round [143] log likelihood: -497018.542485
EM: Round [144] log likelihood: -497018.541405
EM: Round [145] log likelihood: -497018.540358
EM: Round [146] log likelihood: -497018.539344
EM: Round [147] log likelihood: -497018.538362
EM: Round [148] log likelihood: -497018.537411
EM: Round [149] log likelihood: -497018.536490
EM: Round [150] log likelihood: -497018.535597
EM: Round [151] log likelihood: -497018.534732
EM: Round [152] log likelihood: -497018.533894
EM: Round [153] log likelihood: -497018.533083
EM: Round [154] log likelihood: -497018.532296
EM: Round [155] log likelihood: -497018.531534
EM: Round [156] log likelihood: -497018.530795
EM: Round [157] log likelihood: -497018.530080
EM: Round [158] log likelihood: -497018.529387
EM: Round [159] log likelihood: -497018.528715
EM: Round [160] log likelihood: -497018.528063
EM: Round [161] log likelihood: -497018.527432
EM: Round [162] log likelihood: -497018.526821
EM: Round [163] log likelihood: -497018.526228
EM: Round [164] log likelihood: -497018.525654
EM: Round [165] log likelihood: -497018.525097
EM: Round [166] log likelihood: -497018.524558
EM: Round [167] log likelihood: -497018.524035
EM: Round [168] log likelihood: -497018.523528
EM: Round [169] log likelihood: -497018.523037
EM: Round [170] log likelihood: -497018.522560
EM: Round [171] log likelihood: -497018.522099
EM: Round [172] log likelihood: -497018.521651
EM: Round [173] log likelihood: -497018.521218
EM: Round [174] log likelihood: -497018.520797
EM: Round [175] log likelihood: -497018.520389
EM: Round [176] log likelihood: -497018.519994
EM: Round [177] log likelihood: -497018.519611
EM: Round [178] log likelihood: -497018.519240
EM: Round [179] log likelihood: -497018.518879
EM: Round [180] log likelihood: -497018.518530
EM: Round [181] log likelihood: -497018.518192
EM: Round [182] log likelihood: -497018.517864
EM: Round [183] log likelihood: -497018.517545
EM: Round [184] log likelihood: -497018.517237
EM: Round [185] log likelihood: -497018.516937
EM: Round [186] log likelihood: -497018.516647
EM: Round [187] log likelihood: -497018.516366
EM: Round [188] log likelihood: -497018.516093
EM: Round [189] log likelihood: -497018.515828
EM: Round [190] log likelihood: -497018.515572
EM: Round [191] log likelihood: -497018.515323
EM: Round [192] log likelihood: -497018.515082
EM: Round [193] log likelihood: -497018.514848
EM: Round [194] log likelihood: -497018.514621
EM: Round [195] log likelihood: -497018.514400
EM: Round [196] log likelihood: -497018.514187
EM: Round [197] log likelihood: -497018.513980
EM: Round [198] log likelihood: -497018.513779
EM: Round [199] log likelihood: -497018.513584
EM: Round [200] log likelihood: -497018.513395
EM: Round [201] log likelihood: -497018.513212
EM: Round [202] log likelihood: -497018.513034
EM: Round [203] log likelihood: -497018.512862
EM: Round [204] log likelihood: -497018.512694
EM: Round [205] log likelihood: -497018.512532
EM: Round [206] log likelihood: -497018.512375
EM: Round [207] log likelihood: -497018.512222
EM: Round [208] log likelihood: -497018.512074
EM: Round [209] log likelihood: -497018.511930
EM: Round [210] log likelihood: -497018.511791
EM: Round [211] log likelihood: -497018.511655
EM: Round [212] log likelihood: -497018.511524
EM: Round [213] log likelihood: -497018.511397
EM: Round [214] log likelihood: -497018.511273
EM: Round [215] log likelihood: -497018.511153
EM: Round [216] log likelihood: -497018.511037
EM: Round [217] log likelihood: -497018.510924
EM: Round [218] log likelihood: -497018.510814
EM: Round [219] log likelihood: -497018.510708
EM: Round [220] log likelihood: -497018.510605
EM: Round [221] log likelihood: -497018.510505
EM: Round [222] log likelihood: -497018.510408
EM: Stopping iterations at round 222 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -489015.583512
EM: Round [1] log likelihood: -488875.037415
EM: Round [2] log likelihood: -488839.857754
EM: Round [3] log likelihood: -488823.614798
EM: Round [4] log likelihood: -488814.475319
EM: Round [5] log likelihood: -488808.741776
EM: Round [6] log likelihood: -488804.897030
EM: Round [7] log likelihood: -488802.204605
EM: Round [8] log likelihood: -488800.262288
EM: Round [9] log likelihood: -488798.831053
EM: Round [10] log likelihood: -488797.759689
EM: Round [11] log likelihood: -488796.947866
EM: Round [12] log likelihood: -488796.326509
EM: Round [13] log likelihood: -488795.846695
EM: Round [14] log likelihood: -488795.473035
EM: Round [15] log likelihood: -488795.179543
EM: Round [16] log likelihood: -488794.946945
EM: Round [17] log likelihood: -488794.760860
EM: Round [18] log likelihood: -488794.610515
EM: Round [19] log likelihood: -488794.487823
EM: Round [20] log likelihood: -488794.386695
EM: Round [21] log likelihood: -488794.302537
EM: Round [22] log likelihood: -488794.231863
EM: Round [23] log likelihood: -488794.172015
EM: Round [24] log likelihood: -488794.120947
EM: Round [25] log likelihood: -488794.077074
EM: Round [26] log likelihood: -488794.039150
EM: Round [27] log likelihood: -488794.006192
EM: Round [28] log likelihood: -488793.977407
EM: Round [29] log likelihood: -488793.952159
EM: Round [30] log likelihood: -488793.929924
EM: Round [31] log likelihood: -488793.910270
EM: Round [32] log likelihood: -488793.892840
EM: Round [33] log likelihood: -488793.877333
EM: Round [34] log likelihood: -488793.863496
EM: Round [35] log likelihood: -488793.851114
EM: Round [36] log likelihood: -488793.840004
EM: Round [37] log likelihood: -488793.830010
EM: Round [38] log likelihood: -488793.820996
EM: Round [39] log likelihood: -488793.812847
EM: Round [40] log likelihood: -488793.805463
EM: Round [41] log likelihood: -488793.798757
EM: Round [42] log likelihood: -488793.792652
EM: Round [43] log likelihood: -488793.787083
EM: Round [44] log likelihood: -488793.781993
EM: Round [45] log likelihood: -488793.777330
EM: Round [46] log likelihood: -488793.773050
EM: Round [47] log likelihood: -488793.769115
EM: Round [48] log likelihood: -488793.765489
EM: Round [49] log likelihood: -488793.762143
EM: Round [50] log likelihood: -488793.759050
EM: Round [51] log likelihood: -488793.756185
EM: Round [52] log likelihood: -488793.753527
EM: Round [53] log likelihood: -488793.751059
EM: Round [54] log likelihood: -488793.748761
EM: Round [55] log likelihood: -488793.746621
EM: Round [56] log likelihood: -488793.744623
EM: Round [57] log likelihood: -488793.742756
EM: Round [58] log likelihood: -488793.741010
EM: Round [59] log likelihood: -488793.739373
EM: Round [60] log likelihood: -488793.737838
EM: Round [61] log likelihood: -488793.736396
EM: Round [62] log likelihood: -488793.735040
EM: Round [63] log likelihood: -488793.733764
EM: Round [64] log likelihood: -488793.732562
EM: Round [65] log likelihood: -488793.731427
EM: Round [66] log likelihood: -488793.730356
EM: Round [67] log likelihood: -488793.729343
EM: Round [68] log likelihood: -488793.728385
EM: Round [69] log likelihood: -488793.727478
EM: Round [70] log likelihood: -488793.726618
EM: Round [71] log likelihood: -488793.725802
EM: Round [72] log likelihood: -488793.725028
EM: Round [73] log likelihood: -488793.724291
EM: Round [74] log likelihood: -488793.723591
EM: Round [75] log likelihood: -488793.722925
EM: Round [76] log likelihood: -488793.722290
EM: Round [77] log likelihood: -488793.721685
EM: Round [78] log likelihood: -488793.721108
EM: Round [79] log likelihood: -488793.720557
EM: Round [80] log likelihood: -488793.720031
EM: Round [81] log likelihood: -488793.719528
EM: Round [82] log likelihood: -488793.719046
EM: Round [83] log likelihood: -488793.718586
EM: Round [84] log likelihood: -488793.718145
EM: Round [85] log likelihood: -488793.717722
EM: Round [86] log likelihood: -488793.717317
EM: Round [87] log likelihood: -488793.716928
EM: Round [88] log likelihood: -488793.716554
EM: Round [89] log likelihood: -488793.716196
EM: Round [90] log likelihood: -488793.715851
EM: Round [91] log likelihood: -488793.715520
EM: Round [92] log likelihood: -488793.715201
EM: Round [93] log likelihood: -488793.714894
EM: Round [94] log likelihood: -488793.714599
EM: Round [95] log likelihood: -488793.714314
EM: Round [96] log likelihood: -488793.714039
EM: Round [97] log likelihood: -488793.713775
EM: Round [98] log likelihood: -488793.713520
EM: Round [99] log likelihood: -488793.713273
EM: Round [100] log likelihood: -488793.713035
EM: Round [101] log likelihood: -488793.712805
EM: Round [102] log likelihood: -488793.712583
EM: Round [103] log likelihood: -488793.712368
EM: Round [104] log likelihood: -488793.712161
EM: Round [105] log likelihood: -488793.711960
EM: Round [106] log likelihood: -488793.711765
EM: Round [107] log likelihood: -488793.711577
EM: Round [108] log likelihood: -488793.711394
EM: Round [109] log likelihood: -488793.711218
EM: Round [110] log likelihood: -488793.711046
EM: Round [111] log likelihood: -488793.710880
EM: Round [112] log likelihood: -488793.710719
EM: Round [113] log likelihood: -488793.710563
EM: Round [114] log likelihood: -488793.710412
EM: Round [115] log likelihood: -488793.710265
EM: Round [116] log likelihood: -488793.710122
EM: Round [117] log likelihood: -488793.709983
EM: Round [118] log likelihood: -488793.709848
EM: Round [119] log likelihood: -488793.709717
EM: Round [120] log likelihood: -488793.709590
EM: Round [121] log likelihood: -488793.709467
EM: Round [122] log likelihood: -488793.709346
EM: Round [123] log likelihood: -488793.709229
EM: Round [124] log likelihood: -488793.709116
EM: Round [125] log likelihood: -488793.709005
EM: Round [126] log likelihood: -488793.708897
EM: Round [127] log likelihood: -488793.708793
EM: Round [128] log likelihood: -488793.708691
EM: Round [129] log likelihood: -488793.708591
EM: Stopping iterations at round 129 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 77954342 > /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir > /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir --annotate /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir
-done, see /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2700, filtered: 8622)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.W6PcoIXGwL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.W6PcoIXGwL/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000257139.1]
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WARNING, no entry stored in dbm for [ENSG00000249456.1]
WARNING, no entry stored in dbm for [ENSG00000226232.8]
WARNING, no entry stored in dbm for [ENSG00000254254.6]
WARNING, no entry stored in dbm for [ENSG00000278416.1]
WARNING, no entry stored in dbm for [ENSG00000233264.2]
WARNING, no entry stored in dbm for [ENSG00000277283.1]
WARNING, no entry stored in dbm for [ENSG00000203987.3]
WARNING, no entry stored in dbm for [ENSG00000131002.12]
WARNING, no entry stored in dbm for [ENSG00000242299.1]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000223786.1]
WARNING, no entry stored in dbm for [ENSG00000288657.1]
WARNING, no entry stored in dbm for [ENSG00000267665.2]
WARNING, no entry stored in dbm for [ENSG00000285774.3]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000259663.2]
WARNING, no entry stored in dbm for [ENSG00000255325.2]
WARNING, no entry stored in dbm for [ENSG00000232600.3]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000198618.5]
WARNING, no entry stored in dbm for [ENSG00000251218.1]
WARNING, no entry stored in dbm for [ENSG00000250626.3]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000214559.3]
WARNING, no entry stored in dbm for [ENSG00000234911.2]
WARNING, no entry stored in dbm for [ENSG00000259663.2]
WARNING, no entry stored in dbm for [ENSG00000254334.2]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000124097.7]
WARNING, no entry stored in dbm for [ENSG00000262966.2]
WARNING, no entry stored in dbm for [ENSG00000264112.1]
WARNING, no entry stored in dbm for [ENSG00000287097.1]
WARNING, no entry stored in dbm for [ENSG00000276868.1]
WARNING, no entry stored in dbm for [ENSG00000240990.10]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000275131.3]
WARNING, no entry stored in dbm for [ENSG00000234898.1]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000260735.2]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000287367.1]
WARNING, no entry stored in dbm for [ENSG00000269514.3]
WARNING, no entry stored in dbm for [ENSG00000180610.10]
WARNING, no entry stored in dbm for [ENSG00000267322.2]
WARNING, no entry stored in dbm for [ENSG00000248121.8]
WARNING, no entry stored in dbm for [ENSG00000248121.8]
WARNING, no entry stored in dbm for [ENSG00000248121.8]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000246067.8]
WARNING, no entry stored in dbm for [ENSG00000248727.6]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000241679.2]
WARNING, no entry stored in dbm for [ENSG00000254453.1]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000135502.19]
WARNING, no entry stored in dbm for [ENSG00000243033.2]
WARNING, no entry stored in dbm for [ENSG00000253558.1]
WARNING, no entry stored in dbm for [ENSG00000234259.3]
WARNING, no entry stored in dbm for [ENSG00000227646.7]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000226232.8]
WARNING, no entry stored in dbm for [ENSG00000196951.11]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000252316.1]
WARNING, no entry stored in dbm for [ENSG00000287882.1]
WARNING, no entry stored in dbm for [ENSG00000262039.1]
WARNING, no entry stored in dbm for [ENSG00000230417.12]
WARNING, no entry stored in dbm for [ENSG00000237039.1]
WARNING, no entry stored in dbm for [ENSG00000213553.4]
WARNING, no entry stored in dbm for [ENSG00000251474.6]
WARNING, no entry stored in dbm for [ENSG00000229824.1]
WARNING, no entry stored in dbm for [ENSG00000239627.3]
WARNING, no entry stored in dbm for [ENSG00000200728.1]
WARNING, no entry stored in dbm for [ENSG00000200795.1]
WARNING, no entry stored in dbm for [ENSG00000207175.1]
WARNING, no entry stored in dbm for [ENSG00000241785.3]
WARNING, no entry stored in dbm for [ENSG00000229821.1]
WARNING, no entry stored in dbm for [ENSG00000227398.4]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000272622.2]
WARNING, no entry stored in dbm for [ENSG00000285531.1]
WARNING, no entry stored in dbm for [ENSG00000281691.1]
WARNING, no entry stored in dbm for [ENSG00000271551.2]
WARNING, no entry stored in dbm for [ENSG00000271937.1]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000269386.5]
WARNING, no entry stored in dbm for [ENSG00000255857.6]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000286322.1]
WARNING, no entry stored in dbm for [ENSG00000280140.1]
WARNING, no entry stored in dbm for [ENSG00000255476.1]
WARNING, no entry stored in dbm for [ENSG00000230487.8]
WARNING, no entry stored in dbm for [ENSG00000284809.1]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000203761.5]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000177788.6]
WARNING, no entry stored in dbm for [ENSG00000283839.1]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000266227.1]
WARNING, no entry stored in dbm for [ENSG00000226526.1]
WARNING, no entry stored in dbm for [ENSG00000245468.4]
WARNING, no entry stored in dbm for [ENSG00000254943.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000227418.6]
WARNING, no entry stored in dbm for [ENSG00000238197.6]
WARNING, no entry stored in dbm for [ENSG00000251182.2]
WARNING, no entry stored in dbm for [ENSG00000215546.2]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000235975.1]
WARNING, no entry stored in dbm for [ENSG00000253667.2]
WARNING, no entry stored in dbm for [ENSG00000225264.3]
WARNING, no entry stored in dbm for [ENSG00000233685.1]
WARNING, no entry stored in dbm for [ENSG00000225484.7]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000287185.1]
WARNING, no entry stored in dbm for [ENSG00000255910.2]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000258807.5]
WARNING, no entry stored in dbm for [ENSG00000258743.6]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000253557.6]
WARNING, no entry stored in dbm for [ENSG00000250390.2]
WARNING, no entry stored in dbm for [ENSG00000236859.7]
WARNING, no entry stored in dbm for [ENSG00000261441.1]
WARNING, no entry stored in dbm for [ENSG00000228035.1]
WARNING, no entry stored in dbm for [ENSG00000204850.4]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000260971.4]
WARNING, no entry stored in dbm for [ENSG00000237037.9]
WARNING, no entry stored in dbm for [ENSG00000267312.1]
WARNING, no entry stored in dbm for [ENSG00000253750.1]
WARNING, no entry stored in dbm for [ENSG00000206573.9]
WARNING, no entry stored in dbm for [ENSG00000255420.2]
WARNING, no entry stored in dbm for [ENSG00000236700.6]
WARNING, no entry stored in dbm for [ENSG00000243095.1]
WARNING, no entry stored in dbm for [ENSG00000179611.3]
WARNING, no entry stored in dbm for [ENSG00000259868.3]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000225557.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000228590.2]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000186594.14]
WARNING, no entry stored in dbm for [ENSG00000236432.8]
WARNING, no entry stored in dbm for [ENSG00000236432.8]
WARNING, no entry stored in dbm for [ENSG00000272601.1]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000245864.3]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000226571.2]
WARNING, no entry stored in dbm for [ENSG00000271978.1]
WARNING, no entry stored in dbm for [ENSG00000230964.1]
WARNING, no entry stored in dbm for [ENSG00000143429.10]
WARNING, no entry stored in dbm for [ENSG00000258410.1]
WARNING, no entry stored in dbm for [ENSG00000231999.7]
WARNING, no entry stored in dbm for [ENSG00000125122.16]
WARNING, no entry stored in dbm for [ENSG00000247675.7]
WARNING, no entry stored in dbm for [ENSG00000257139.1]
WARNING, no entry stored in dbm for [ENSG00000255300.6]
WARNING, no entry stored in dbm for [ENSG00000255300.6]
WARNING, no entry stored in dbm for [ENSG00000248869.7]
WARNING, no entry stored in dbm for [ENSG00000283052.1]
WARNING, no entry stored in dbm for [ENSG00000277851.2]
WARNING, no entry stored in dbm for [ENSG00000261064.1]
WARNING, no entry stored in dbm for [ENSG00000261064.1]
WARNING, no entry stored in dbm for [ENSG00000236393.2]
WARNING, no entry stored in dbm for [ENSG00000261156.6]
WARNING, no entry stored in dbm for [ENSG00000233008.6]
WARNING, no entry stored in dbm for [ENSG00000267337.2]
WARNING, no entry stored in dbm for [ENSG00000223704.2]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000247157.7]
WARNING, no entry stored in dbm for [ENSG00000233806.7]
WARNING, no entry stored in dbm for [ENSG00000281912.1]
WARNING, no entry stored in dbm for [ENSG00000231419.6]
WARNING, no entry stored in dbm for [ENSG00000175611.12]
WARNING, no entry stored in dbm for [ENSG00000227674.3]
WARNING, no entry stored in dbm for [ENSG00000231028.9]
WARNING, no entry stored in dbm for [ENSG00000223768.2]
WARNING, no entry stored in dbm for [ENSG00000225880.5]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000236885.2]
WARNING, no entry stored in dbm for [ENSG00000204904.7]
WARNING, no entry stored in dbm for [ENSG00000214417.4]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000257259.3]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000284376.1]
WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000259668.6]
WARNING, no entry stored in dbm for [ENSG00000279720.1]
WARNING, no entry stored in dbm for [ENSG00000267454.6]
WARNING, no entry stored in dbm for [ENSG00000236172.7]
WARNING, no entry stored in dbm for [ENSG00000235257.9]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000226066.1]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000187762.5]
WARNING, no entry stored in dbm for [ENSG00000224509.2]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000099251.14]
WARNING, no entry stored in dbm for [ENSG00000226113.1]
WARNING, no entry stored in dbm for [ENSG00000224365.1]
WARNING, no entry stored in dbm for [ENSG00000229384.2]
WARNING, no entry stored in dbm for [ENSG00000259845.1]
WARNING, no entry stored in dbm for [ENSG00000259845.1]
WARNING, no entry stored in dbm for [ENSG00000259845.1]
WARNING, no entry stored in dbm for [ENSG00000258741.4]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000230295.1]
WARNING, no entry stored in dbm for [ENSG00000232546.1]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000227113.2]
WARNING, no entry stored in dbm for [ENSG00000233910.1]
WARNING, no entry stored in dbm for [ENSG00000235237.1]
WARNING, no entry stored in dbm for [ENSG00000103832.10]
WARNING, no entry stored in dbm for [ENSG00000261279.5]
WARNING, no entry stored in dbm for [ENSG00000235583.2]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000236859.7]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000235706.8]
WARNING, no entry stored in dbm for [ENSG00000177788.6]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000223652.2]
WARNING, no entry stored in dbm for [ENSG00000255008.3]
WARNING, no entry stored in dbm for [ENSG00000269752.1]
WARNING, no entry stored in dbm for [ENSG00000233064.2]
WARNING, no entry stored in dbm for [ENSG00000279746.1]
WARNING, no entry stored in dbm for [ENSG00000214145.7]
WARNING, no entry stored in dbm for [ENSG00000236088.10]
WARNING, no entry stored in dbm for [ENSG00000188828.13]
WARNING, no entry stored in dbm for [ENSG00000261240.1]
WARNING, no entry stored in dbm for [ENSG00000286225.1]
WARNING, no entry stored in dbm for [ENSG00000255319.5]
WARNING, no entry stored in dbm for [ENSG00000230424.1]
WARNING, no entry stored in dbm for [ENSG00000255267.4]
WARNING, no entry stored in dbm for [ENSG00000255267.4]
WARNING, no entry stored in dbm for [ENSG00000214919.3]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000258792.4]
WARNING, no entry stored in dbm for [ENSG00000220256.4]
WARNING, no entry stored in dbm for [ENSG00000244306.11]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000235963.1]
WARNING, no entry stored in dbm for [ENSG00000234773.7]
WARNING, no entry stored in dbm for [ENSG00000228061.7]
WARNING, no entry stored in dbm for [ENSG00000228061.7]
WARNING, no entry stored in dbm for [ENSG00000224597.10]
WARNING, no entry stored in dbm for [ENSG00000255860.3]
WARNING, no entry stored in dbm for [ENSG00000260062.3]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000258039.2]
WARNING, no entry stored in dbm for [ENSG00000200783.1]
WARNING, no entry stored in dbm for [ENSG00000271394.1]
WARNING, no entry stored in dbm for [ENSG00000235244.4]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000226450.2]
WARNING, no entry stored in dbm for [ENSG00000232503.1]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000236088.10]
WARNING, no entry stored in dbm for [ENSG00000232814.2]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000256594.8]
WARNING, no entry stored in dbm for [ENSG00000243389.1]
WARNING, no entry stored in dbm for [ENSG00000227617.9]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [ENSG00000240498.9]
WARNING, no entry stored in dbm for [ENSG00000236430.1]
WARNING, no entry stored in dbm for [ENSG00000224404.2]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000203799.13]
WARNING, no entry stored in dbm for [ENSG00000265641.1]
WARNING, no entry stored in dbm for [ENSG00000274642.1]
WARNING, no entry stored in dbm for [ENSG00000272595.2]
WARNING, no entry stored in dbm for [ENSG00000227742.2]
WARNING, no entry stored in dbm for [ENSG00000184906.11]
WARNING, no entry stored in dbm for [ENSG00000222047.9]
WARNING, no entry stored in dbm for [ENSG00000230131.6]
WARNING, no entry stored in dbm for [ENSG00000239291.1]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000279135.1]
WARNING, no entry stored in dbm for [ENSG00000234921.1]
WARNING, no entry stored in dbm for [ENSG00000258185.2]
WARNING, no entry stored in dbm for [ENSG00000223509.8]
WARNING, no entry stored in dbm for [ENSG00000204934.10]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000226864.2]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000257986.3]
WARNING, no entry stored in dbm for [ENSG00000259768.6]
WARNING, no entry stored in dbm for [ENSG00000277147.6]
WARNING, no entry stored in dbm for [ENSG00000226835.3]
WARNING, no entry stored in dbm for [ENSG00000234021.1]
WARNING, no entry stored in dbm for [ENSG00000255528.1]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000261070.1]
WARNING, no entry stored in dbm for [ENSG00000255517.6]
WARNING, no entry stored in dbm for [ENSG00000242553.1]
WARNING, no entry stored in dbm for [ENSG00000247137.9]
WARNING, no entry stored in dbm for [ENSG00000261286.1]
WARNING, no entry stored in dbm for [ENSG00000265260.2]
WARNING, no entry stored in dbm for [ENSG00000243373.3]
WARNING, no entry stored in dbm for [ENSG00000248994.2]
WARNING, no entry stored in dbm for [ENSG00000286212.2]
WARNING, no entry stored in dbm for [ENSG00000225177.6]
WARNING, no entry stored in dbm for [ENSG00000248554.1]
WARNING, no entry stored in dbm for [ENSG00000257167.2]
WARNING, no entry stored in dbm for [ENSG00000231259.5]
WARNING, no entry stored in dbm for [ENSG00000224477.5]
WARNING, no entry stored in dbm for [ENSG00000286563.1]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000262943.7]
WARNING, no entry stored in dbm for [ENSG00000215067.10]
WARNING, no entry stored in dbm for [ENSG00000259984.1]
WARNING, no entry stored in dbm for [ENSG00000232576.2]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000215835.2]
WARNING, no entry stored in dbm for [ENSG00000273933.1]
WARNING, no entry stored in dbm for [ENSG00000225313.5]
WARNING, no entry stored in dbm for [ENSG00000286863.1]
WARNING, no entry stored in dbm for [ENSG00000287452.2]
WARNING, no entry stored in dbm for [ENSG00000287241.1]
WARNING, no entry stored in dbm for [ENSG00000254532.2]
WARNING, no entry stored in dbm for [ENSG00000223786.1]
WARNING, no entry stored in dbm for [ENSG00000288583.1]
WARNING, no entry stored in dbm for [ENSG00000287368.1]
WARNING, no entry stored in dbm for [ENSG00000239665.8]
WARNING, no entry stored in dbm for [ENSG00000239665.8]
WARNING, no entry stored in dbm for [ENSG00000229272.2]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000287126.1]
WARNING, no entry stored in dbm for [ENSG00000230615.7]
WARNING, no entry stored in dbm for [ENSG00000236961.1]
WARNING, no entry stored in dbm for [ENSG00000227220.1]
WARNING, no entry stored in dbm for [ENSG00000236166.1]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000226089.2]
WARNING, no entry stored in dbm for [ENSG00000237301.1]
WARNING, no entry stored in dbm for [ENSG00000277425.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000284602.1]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000232599.1]
WARNING, no entry stored in dbm for [ENSG00000151631.8]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000225783.8]
WARNING, no entry stored in dbm for [ENSG00000241383.2]
WARNING, no entry stored in dbm for [ENSG00000188185.13]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000229800.1]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000233585.2]
WARNING, no entry stored in dbm for [ENSG00000275121.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000265798.6]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000258140.2]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000283602.1]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000279602.1]
WARNING, no entry stored in dbm for [ENSG00000251244.2]
WARNING, no entry stored in dbm for [ENSG00000260037.5]
WARNING, no entry stored in dbm for [ENSG00000253177.2]
WARNING, no entry stored in dbm for [ENSG00000275322.1]
WARNING, no entry stored in dbm for [ENSG00000253982.2]
WARNING, no entry stored in dbm for [ENSG00000248161.5]
WARNING, no entry stored in dbm for [ENSG00000286152.1]
WARNING, no entry stored in dbm for [ENSG00000284968.1]
WARNING, no entry stored in dbm for [ENSG00000286904.1]
WARNING, no entry stored in dbm for [ENSG00000230991.2]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000254365.1]
WARNING, no entry stored in dbm for [ENSG00000254943.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000259363.6]
WARNING, no entry stored in dbm for [ENSG00000267101.7]
WARNING, no entry stored in dbm for [ENSG00000267101.7]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000279259.1]
WARNING, no entry stored in dbm for [ENSG00000240207.7]
WARNING, no entry stored in dbm for [ENSG00000277715.1]
WARNING, no entry stored in dbm for [ENSG00000256072.1]
WARNING, no entry stored in dbm for [ENSG00000286035.1]
WARNING, no entry stored in dbm for [ENSG00000254559.1]
WARNING, no entry stored in dbm for [ENSG00000254398.1]
WARNING, no entry stored in dbm for [ENSG00000103832.10]
WARNING, no entry stored in dbm for [ENSG00000235140.2]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000248538.8]
WARNING, no entry stored in dbm for [ENSG00000267169.2]
WARNING, no entry stored in dbm for [ENSG00000267169.2]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000267260.2]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000259675.2]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000259772.6]
WARNING, no entry stored in dbm for [ENSG00000253496.3]
WARNING, no entry stored in dbm for [ENSG00000225840.2]
WARNING, no entry stored in dbm for [ENSG00000225840.2]
WARNING, no entry stored in dbm for [ENSG00000222043.2]
WARNING, no entry stored in dbm for [ENSG00000258185.2]
WARNING, no entry stored in dbm for [ENSG00000226266.6]
WARNING, no entry stored in dbm for [ENSG00000216895.9]
WARNING, no entry stored in dbm for [ENSG00000260364.1]
WARNING, no entry stored in dbm for [ENSG00000280257.1]
WARNING, no entry stored in dbm for [ENSG00000224063.6]
WARNING, no entry stored in dbm for [ENSG00000223838.2]
WARNING, no entry stored in dbm for [ENSG00000228509.6]
WARNING, no entry stored in dbm for [ENSG00000270114.1]
WARNING, no entry stored in dbm for [ENSG00000275850.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000235592.1]
WARNING, no entry stored in dbm for [ENSG00000261312.1]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000283366.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]


	* STAR-Fusion complete.  See output: /tmp/nxf.W6PcoIXGwL/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)