[W::hts_idx_load3] The index file is older than the data file: 659_beZ_T1_TRNA_2_B2372Y3LT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	25047961
Known Splicing Events:	24732894
Partial Novel Splicing Events:	129371
Novel Splicing Events:	173751
Filtered Splicing Events:	11945

Total splicing  Junctions:	236199
Known Splicing Junctions:	189854
Partial Novel Splicing Junctions:	27598
Novel Splicing Junctions:	18747

===================================================================
Create BED file ...
Create Interact file ...