Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/0fae7ef9d25f6d0525eca8ec872e4e/dna_s767.Aligned.sortedByCoord.out.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/779ebd7cfd2fa8faee9d3fa563c87c/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/779ebd7cfd2fa8faee9d3fa563c87c/.command.run
==> STAGING COMPLETE (3 inputs)
PAIRED_END_BAM_INPUT
Processed 1000000 records
Processed 2000000 records
Processed 3000000 records
Processed 4000000 records
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Processed 10000000 records
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Processed 19000000 records
Processed 20000000 records
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Processed 23000000 records
Processed 24000000 records
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Processed 30000000 records
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Processed 32000000 records
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Processed 34000000 records
Processed 35000000 records
Processed 36000000 records
Processed 37000000 records
Processed 38000000 records
Processed 39000000 records
Processed 40000000 records
Processed 41000000 records
Processed 42000000 records
Processed 43000000 records
Processed 44000000 records
Processed 45000000 records
Processed 46000000 records
Processed 47000000 records
Processed 48000000 records
Processed 49000000 records
Processed 50000000 records
Processed 51000000 records
Processed 52000000 records
Processed 53000000 records
Processed 54000000 records
Processed 55000000 records
Processed 56000000 records
Processed 57000000 records
Processed 58000000 records
Processed 59000000 records
Processed 60000000 records
Processed 61000000 records
Processed 62000000 records
Processed 63000000 records
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Processed 67000000 records
Processed 68000000 records
Processed 69000000 records
Processed 70000000 records
Processed 71000000 records
Processed 72000000 records
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Processed 75000000 records
Processed 76000000 records
Processed 77000000 records
Processed 78000000 records
Processed 79000000 records
Processed 80000000 records
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Processed 88000000 records
Processed 89000000 records
Processed 90000000 records
Processed 91000000 records
Processed 92000000 records
Processed 93000000 records
Processed 94000000 records
Processed 95000000 records
Processed 96000000 records
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Processed 98000000 records
Processed 99000000 records
Processed 100000000 records
Processed 101000000 records
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Processed 104000000 records
Processed 105000000 records
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Processed 108000000 records
Processed 109000000 records
Processed 110000000 records
Processed 111000000 records
Processed 112000000 records
Processed 113000000 records
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Processed 117000000 records
Processed 118000000 records
Processed 119000000 records
Processed 120000000 records
Processed 121000000 records
Processed 122000000 records
Processed 123000000 records
Processed 124000000 records
Processed 125000000 records
Processed 126000000 records
Processed 127000000 records
Processed 128000000 records
Processed 129000000 records
Processed 130000000 records
Processed 131000000 records
Processed 132000000 records
Processed 133000000 records
Processed 134000000 records
Processed 135000000 records
Processed 136000000 records
Processed 137000000 records
Processed 138000000 records
Processed 139000000 records
Processed 140000000 records
Processed 141000000 records
Processed 142000000 records
Processed 143000000 records
Processed 144000000 records
Processed 145000000 records
Processed 146000000 records
Processed 147000000 records
Processed 148000000 records
Processed 149000000 records
Processed 150000000 records
Processed 151000000 records
Processed 152000000 records
Processed 153000000 records
Processed 154000000 records
Processed 155000000 records
Processed 156000000 records
Processed 157000000 records
Processed 158000000 records
Processed 159000000 records
Processed 160000000 records
Processed 161000000 records
Processed 162000000 records
Processed 163000000 records
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Processed 165000000 records
Processed 166000000 records
Processed 167000000 records
Processed 168000000 records
Processed 169000000 records
Processed 170000000 records
Processed 171000000 records
Processed 172000000 records
Processed 173000000 records
Processed 174000000 records
Processed 175000000 records
Processed 176000000 records
Processed 177000000 records
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Processed 179000000 records
Processed 180000000 records
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Processed 182000000 records
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paired = 113396396
unpaired = 1687293
MERGED PAIRED END READS = 113396396
MATES PROCESSED = 228480085
TOTAL READS = 115083689
DISTINCT READS = 9.15683e+07
DISTINCT COUNTS = 184
MAX COUNT = 176181
COUNTS OF 1 = 7.33566e+07
MAX TERMS = 84
OBSERVED COUNTS (176182)
1 73356599
2 14456240
3 2885769
4 628756
5 156048
6 45767
7 16480
8 7434
9 4142
10 2518
11 1755
12 1286
13 982
14 756
15 561
16 461
17 346
18 309
19 250
20 188
21 185
22 178
23 111
24 122
25 87
26 86
27 59
28 57
29 72
30 40
31 51
32 37
33 29
34 38
35 23
36 22
37 23
38 23
39 17
40 12
41 18
42 18
43 14
44 8
45 10
46 10
47 6
48 6
49 9
50 6
51 4
52 5
53 6
54 4
55 4
56 6
57 6
58 7
59 3
60 4
61 9
62 1
63 4
64 4
65 5
66 3
67 2
68 2
69 7
70 1
71 1
72 2
73 3
74 4
75 2
76 2
77 1
78 2
79 2
80 1
81 1
82 1
83 1
84 2
85 3
88 2
89 1
90 2
91 2
92 3
93 4
94 2
95 2
96 1
98 1
99 2
100 2
101 1
102 1
103 1
104 3
105 1
106 2
107 2
109 3
110 2
111 1
113 2
115 1
117 3
118 1
121 3
123 1
124 3
125 2
126 1
127 3
129 2
130 1
131 2
132 2
136 1
138 1
139 2
141 2
142 2
143 1
144 2
145 1
146 1
153 1
154 2
158 1
159 1
164 1
170 1
179 2
182 1
184 1
193 1
194 1
204 1
205 1
212 2
215 1
222 1
225 1
229 1
253 1
271 1
274 1
290 1
293 1
302 1
304 1
326 1
327 1
332 1
352 1
366 1
372 1
414 1
431 1
460 1
465 1
468 1
534 1
542 1
591 1
598 1
610 1
647 1
706 1
758 1
770 1
838 1
845 1
923 1
931 1
1050 1
1235 1
1339 1
2065 1
176181 1
[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
..............._._..........._.._........_......__.._.....___..___..._..
.._........._......._....__.........._.._.........
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]