Started job on | Jun 08 07:18:35
Started mapping on | Jun 08 07:20:44
Finished on | Jun 08 07:39:04
Mapping speed, Million of reads per hour | 376.87
Number of input reads | 115155830
Average input read length | 288
UNIQUE READS:
Uniquely mapped reads number | 108888318
Uniquely mapped reads % | 94.56%
Average mapped length | 288.21
Number of splices: Total | 379898
Number of splices: Annotated (sjdb) | 225750
Number of splices: GT/AG | 327653
Number of splices: GC/AG | 39748
Number of splices: AT/AC | 1890
Number of splices: Non-canonical | 10607
Mismatch rate per base, % | 0.20%
Deletion rate per base | 0.01%
Deletion average length | 1.64
Insertion rate per base | 0.01%
Insertion average length | 2.30
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 4105925
% of reads mapped to multiple loci | 3.57%
Number of reads mapped to too many loci | 252304
% of reads mapped to too many loci | 0.22%
UNMAPPED READS:
Number of reads unmapped: too many mismatches | 191719
% of reads unmapped: too many mismatches | 0.17%
Number of reads unmapped: too short | 1054960
% of reads unmapped: too short | 0.92%
Number of reads unmapped: other | 332269
% of reads unmapped: other | 0.29%
CHIMERIC READS:
Number of chimeric reads | 1044723
% of chimeric reads | 0.91%