File Info

Filename
dna_s767.Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/0fae7ef9d25f6d0525eca8ec872e4e/dna_s767.Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 07:18:35
                             Started mapping on |	Jun 08 07:20:44
                                    Finished on |	Jun 08 07:39:04
       Mapping speed, Million of reads per hour |	376.87

                          Number of input reads |	115155830
                      Average input read length |	288
                                    UNIQUE READS:
                   Uniquely mapped reads number |	108888318
                        Uniquely mapped reads % |	94.56%
                          Average mapped length |	288.21
                       Number of splices: Total |	379898
            Number of splices: Annotated (sjdb) |	225750
                       Number of splices: GT/AG |	327653
                       Number of splices: GC/AG |	39748
                       Number of splices: AT/AC |	1890
               Number of splices: Non-canonical |	10607
                      Mismatch rate per base, % |	0.20%
                         Deletion rate per base |	0.01%
                        Deletion average length |	1.64
                        Insertion rate per base |	0.01%
                       Insertion average length |	2.30
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	4105925
             % of reads mapped to multiple loci |	3.57%
        Number of reads mapped to too many loci |	252304
             % of reads mapped to too many loci |	0.22%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	191719
       % of reads unmapped: too many mismatches |	0.17%
            Number of reads unmapped: too short |	1054960
                 % of reads unmapped: too short |	0.92%
                Number of reads unmapped: other |	332269
                     % of reads unmapped: other |	0.29%
                                  CHIMERIC READS:
                       Number of chimeric reads |	1044723
                            % of chimeric reads |	0.91%