Started job on | Jun 08 07:18:35
Started mapping on | Jun 08 07:21:01
Finished on | Jun 08 07:39:38
Mapping speed, Million of reads per hour | 382.60
Number of input reads | 118711267
Average input read length | 285
UNIQUE READS:
Uniquely mapped reads number | 112114260
Uniquely mapped reads % | 94.44%
Average mapped length | 285.69
Number of splices: Total | 397606
Number of splices: Annotated (sjdb) | 239839
Number of splices: GT/AG | 343688
Number of splices: GC/AG | 41994
Number of splices: AT/AC | 2050
Number of splices: Non-canonical | 9874
Mismatch rate per base, % | 0.21%
Deletion rate per base | 0.01%
Deletion average length | 1.63
Insertion rate per base | 0.01%
Insertion average length | 2.33
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 4320630
% of reads mapped to multiple loci | 3.64%
Number of reads mapped to too many loci | 280449
% of reads mapped to too many loci | 0.24%
UNMAPPED READS:
Number of reads unmapped: too many mismatches | 208790
% of reads unmapped: too many mismatches | 0.18%
Number of reads unmapped: too short | 1065638
% of reads unmapped: too short | 0.90%
Number of reads unmapped: other | 360471
% of reads unmapped: other | 0.30%
CHIMERIC READS:
Number of chimeric reads | 1077253
% of chimeric reads | 0.91%