Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/690beb0ed0ff8b43e61033b9412201/BVT_FFPE_TRNA_bst_06_200_50ng_50ng_2.fastp.fastq.gz
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/031fae4bc2a948072fb2adda4c53ae/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/205aaf4bc33045bfb2ff91a41b575a/BVT_FFPE_TRNA_bst_06_200_50ng_50ng.Chimeric.out.junction
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/031fae4bc2a948072fb2adda4c53ae/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/690beb0ed0ff8b43e61033b9412201/BVT_FFPE_TRNA_bst_06_200_50ng_50ng_1.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.P85UbqNjD2/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary
-sample contains 98837000 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir -J /tmp/nxf.P85UbqNjD2/BVT_FFPE_TRNA_bst_06_200_50ng_50ng.Chimeric.out.junction -O /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.P85UbqNjD2/BVT_FFPE_TRNA_bst_06_200_50ng_50ng.Chimeric.out.junction
-building interval tree based on /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes
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[1160000], rate=89002.56/min -building interval tree based on /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes
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[1160000], rate=81024.45/min -building interval tree based on /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes
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[1150000], rate=72708.11/min -building interval tree based on /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes
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[1160000], rate=72049.69/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir --filt_file /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
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5142857.14 reads per min processed...
5250000.00 reads per min processed...
5333333.33 reads per min processed...
4909090.91 reads per min processed...
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4714285.71 reads per min processed...
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4588235.29 reads per min processed...
4421052.63 reads per min processed...
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4571428.57 reads per min processed...
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4666666.67 reads per min processed...
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4838709.68 reads per min processed...
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4800000.00 reads per min processed...
4829268.29 reads per min processed...
4744186.05 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.P85UbqNjD2/BVT_FFPE_TRNA_bst_06_200_50ng_50ng.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -346281.853480
EM: Round [1] log likelihood: -346058.461828
EM: Round [2] log likelihood: -345980.869474
EM: Round [3] log likelihood: -345945.509330
EM: Round [4] log likelihood: -345926.996032
EM: Round [5] log likelihood: -345916.503486
EM: Round [6] log likelihood: -345910.204955
EM: Round [7] log likelihood: -345906.234203
EM: Round [8] log likelihood: -345903.618613
EM: Round [9] log likelihood: -345901.826639
EM: Round [10] log likelihood: -345900.555589
EM: Round [11] log likelihood: -345899.626343
EM: Round [12] log likelihood: -345898.928975
EM: Round [13] log likelihood: -345898.393668
EM: Round [14] log likelihood: -345897.974634
EM: Round [15] log likelihood: -345897.640955
EM: Round [16] log likelihood: -345897.371194
EM: Round [17] log likelihood: -345897.150142
EM: Round [18] log likelihood: -345896.966785
EM: Round [19] log likelihood: -345896.813001
EM: Round [20] log likelihood: -345896.682710
EM: Round [21] log likelihood: -345896.571293
EM: Round [22] log likelihood: -345896.475199
EM: Round [23] log likelihood: -345896.391666
EM: Round [24] log likelihood: -345896.318525
EM: Round [25] log likelihood: -345896.254056
EM: Round [26] log likelihood: -345896.196879
EM: Round [27] log likelihood: -345896.145882
EM: Round [28] log likelihood: -345896.100162
EM: Round [29] log likelihood: -345896.058975
EM: Round [30] log likelihood: -345896.021709
EM: Round [31] log likelihood: -345895.987854
EM: Round [32] log likelihood: -345895.956985
EM: Round [33] log likelihood: -345895.928743
EM: Round [34] log likelihood: -345895.902822
EM: Round [35] log likelihood: -345895.878965
EM: Round [36] log likelihood: -345895.856949
EM: Round [37] log likelihood: -345895.836582
EM: Round [38] log likelihood: -345895.817700
EM: Round [39] log likelihood: -345895.800158
EM: Round [40] log likelihood: -345895.783831
EM: Round [41] log likelihood: -345895.768607
EM: Round [42] log likelihood: -345895.754390
EM: Round [43] log likelihood: -345895.741093
EM: Round [44] log likelihood: -345895.728640
EM: Round [45] log likelihood: -345895.716963
EM: Round [46] log likelihood: -345895.705999
EM: Round [47] log likelihood: -345895.695695
EM: Round [48] log likelihood: -345895.686001
EM: Round [49] log likelihood: -345895.676871
EM: Round [50] log likelihood: -345895.668266
EM: Round [51] log likelihood: -345895.660149
EM: Round [52] log likelihood: -345895.652486
EM: Round [53] log likelihood: -345895.645247
EM: Round [54] log likelihood: -345895.638403
EM: Round [55] log likelihood: -345895.631929
EM: Round [56] log likelihood: -345895.625801
EM: Round [57] log likelihood: -345895.619998
EM: Round [58] log likelihood: -345895.614498
EM: Round [59] log likelihood: -345895.609285
EM: Round [60] log likelihood: -345895.604340
EM: Round [61] log likelihood: -345895.599647
EM: Round [62] log likelihood: -345895.595193
EM: Round [63] log likelihood: -345895.590962
EM: Round [64] log likelihood: -345895.586943
EM: Round [65] log likelihood: -345895.583123
EM: Round [66] log likelihood: -345895.579491
EM: Round [67] log likelihood: -345895.576036
EM: Round [68] log likelihood: -345895.572750
EM: Round [69] log likelihood: -345895.569623
EM: Round [70] log likelihood: -345895.566646
EM: Round [71] log likelihood: -345895.563812
EM: Round [72] log likelihood: -345895.561112
EM: Round [73] log likelihood: -345895.558540
EM: Round [74] log likelihood: -345895.556089
EM: Round [75] log likelihood: -345895.553753
EM: Round [76] log likelihood: -345895.551526
EM: Round [77] log likelihood: -345895.549402
EM: Round [78] log likelihood: -345895.547377
EM: Round [79] log likelihood: -345895.545445
EM: Round [80] log likelihood: -345895.543602
EM: Round [81] log likelihood: -345895.541843
EM: Round [82] log likelihood: -345895.540164
EM: Round [83] log likelihood: -345895.538561
EM: Round [84] log likelihood: -345895.537031
EM: Round [85] log likelihood: -345895.535569
EM: Round [86] log likelihood: -345895.534173
EM: Round [87] log likelihood: -345895.532840
EM: Round [88] log likelihood: -345895.531566
EM: Round [89] log likelihood: -345895.530349
EM: Round [90] log likelihood: -345895.529186
EM: Round [91] log likelihood: -345895.528074
EM: Round [92] log likelihood: -345895.527012
EM: Round [93] log likelihood: -345895.525996
EM: Round [94] log likelihood: -345895.525025
EM: Round [95] log likelihood: -345895.524096
EM: Round [96] log likelihood: -345895.523208
EM: Round [97] log likelihood: -345895.522358
EM: Round [98] log likelihood: -345895.521545
EM: Round [99] log likelihood: -345895.520768
EM: Round [100] log likelihood: -345895.520024
EM: Round [101] log likelihood: -345895.519312
EM: Round [102] log likelihood: -345895.518631
EM: Round [103] log likelihood: -345895.517979
EM: Round [104] log likelihood: -345895.517356
EM: Round [105] log likelihood: -345895.516758
EM: Round [106] log likelihood: -345895.516187
EM: Round [107] log likelihood: -345895.515639
EM: Round [108] log likelihood: -345895.515115
EM: Round [109] log likelihood: -345895.514613
EM: Round [110] log likelihood: -345895.514133
EM: Round [111] log likelihood: -345895.513673
EM: Round [112] log likelihood: -345895.513232
EM: Round [113] log likelihood: -345895.512809
EM: Round [114] log likelihood: -345895.512405
EM: Round [115] log likelihood: -345895.512017
EM: Round [116] log likelihood: -345895.511646
EM: Round [117] log likelihood: -345895.511290
EM: Round [118] log likelihood: -345895.510950
EM: Round [119] log likelihood: -345895.510623
EM: Round [120] log likelihood: -345895.510310
EM: Round [121] log likelihood: -345895.510010
EM: Round [122] log likelihood: -345895.509722
EM: Round [123] log likelihood: -345895.509447
EM: Round [124] log likelihood: -345895.509182
EM: Round [125] log likelihood: -345895.508929
EM: Round [126] log likelihood: -345895.508686
EM: Round [127] log likelihood: -345895.508453
EM: Round [128] log likelihood: -345895.508230
EM: Round [129] log likelihood: -345895.508016
EM: Round [130] log likelihood: -345895.507810
EM: Round [131] log likelihood: -345895.507613
EM: Round [132] log likelihood: -345895.507424
EM: Round [133] log likelihood: -345895.507243
EM: Round [134] log likelihood: -345895.507069
EM: Round [135] log likelihood: -345895.506902
EM: Round [136] log likelihood: -345895.506742
EM: Round [137] log likelihood: -345895.506589
EM: Round [138] log likelihood: -345895.506441
EM: Round [139] log likelihood: -345895.506300
EM: Round [140] log likelihood: -345895.506164
EM: Round [141] log likelihood: -345895.506034
EM: Round [142] log likelihood: -345895.505909
EM: Round [143] log likelihood: -345895.505789
EM: Round [144] log likelihood: -345895.505674
EM: Round [145] log likelihood: -345895.505564
EM: Round [146] log likelihood: -345895.505458
EM: Round [147] log likelihood: -345895.505356
EM: Round [148] log likelihood: -345895.505258
EM: Stopping iterations at round 148 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -345584.857661
EM: Round [1] log likelihood: -345402.061660
EM: Round [2] log likelihood: -345340.272146
EM: Round [3] log likelihood: -345312.758694
EM: Round [4] log likelihood: -345298.567749
EM: Round [5] log likelihood: -345290.605090
EM: Round [6] log likelihood: -345285.870102
EM: Round [7] log likelihood: -345282.919219
EM: Round [8] log likelihood: -345281.003391
EM: Round [9] log likelihood: -345279.713321
EM: Round [10] log likelihood: -345278.815865
EM: Round [11] log likelihood: -345278.173257
EM: Round [12] log likelihood: -345277.701285
EM: Round [13] log likelihood: -345277.346816
EM: Round [14] log likelihood: -345277.075320
EM: Round [15] log likelihood: -345276.863734
EM: Round [16] log likelihood: -345276.696269
EM: Round [17] log likelihood: -345276.561867
EM: Round [18] log likelihood: -345276.452630
EM: Round [19] log likelihood: -345276.362817
EM: Round [20] log likelihood: -345276.288187
EM: Round [21] log likelihood: -345276.225563
EM: Round [22] log likelihood: -345276.172534
EM: Round [23] log likelihood: -345276.127251
EM: Round [24] log likelihood: -345276.088276
EM: Round [25] log likelihood: -345276.054484
EM: Round [26] log likelihood: -345276.024985
EM: Round [27] log likelihood: -345275.999068
EM: Round [28] log likelihood: -345275.976162
EM: Round [29] log likelihood: -345275.955802
EM: Round [30] log likelihood: -345275.937611
EM: Round [31] log likelihood: -345275.921277
EM: Round [32] log likelihood: -345275.906543
EM: Round [33] log likelihood: -345275.893194
EM: Round [34] log likelihood: -345275.881051
EM: Round [35] log likelihood: -345275.869963
EM: Round [36] log likelihood: -345275.859802
EM: Round [37] log likelihood: -345275.850461
EM: Round [38] log likelihood: -345275.841845
EM: Round [39] log likelihood: -345275.833876
EM: Round [40] log likelihood: -345275.826485
EM: Round [41] log likelihood: -345275.819613
EM: Round [42] log likelihood: -345275.813208
EM: Round [43] log likelihood: -345275.807226
EM: Round [44] log likelihood: -345275.801627
EM: Round [45] log likelihood: -345275.796377
EM: Round [46] log likelihood: -345275.791446
EM: Round [47] log likelihood: -345275.786806
EM: Round [48] log likelihood: -345275.782434
EM: Round [49] log likelihood: -345275.778309
EM: Round [50] log likelihood: -345275.774411
EM: Round [51] log likelihood: -345275.770724
EM: Round [52] log likelihood: -345275.767232
EM: Round [53] log likelihood: -345275.763922
EM: Round [54] log likelihood: -345275.760781
EM: Round [55] log likelihood: -345275.757797
EM: Round [56] log likelihood: -345275.754962
EM: Round [57] log likelihood: -345275.752264
EM: Round [58] log likelihood: -345275.749697
EM: Round [59] log likelihood: -345275.747251
EM: Round [60] log likelihood: -345275.744920
EM: Round [61] log likelihood: -345275.742696
EM: Round [62] log likelihood: -345275.740575
EM: Round [63] log likelihood: -345275.738550
EM: Round [64] log likelihood: -345275.736616
EM: Round [65] log likelihood: -345275.734768
EM: Round [66] log likelihood: -345275.733001
EM: Round [67] log likelihood: -345275.731312
EM: Round [68] log likelihood: -345275.729696
EM: Round [69] log likelihood: -345275.728150
EM: Round [70] log likelihood: -345275.726671
EM: Round [71] log likelihood: -345275.725254
EM: Round [72] log likelihood: -345275.723897
EM: Round [73] log likelihood: -345275.722598
EM: Round [74] log likelihood: -345275.721353
EM: Round [75] log likelihood: -345275.720160
EM: Round [76] log likelihood: -345275.719016
EM: Round [77] log likelihood: -345275.717920
EM: Round [78] log likelihood: -345275.716868
EM: Round [79] log likelihood: -345275.715860
EM: Round [80] log likelihood: -345275.714893
EM: Round [81] log likelihood: -345275.713965
EM: Round [82] log likelihood: -345275.713075
EM: Round [83] log likelihood: -345275.712221
EM: Round [84] log likelihood: -345275.711402
EM: Round [85] log likelihood: -345275.710615
EM: Round [86] log likelihood: -345275.709860
EM: Round [87] log likelihood: -345275.709135
EM: Round [88] log likelihood: -345275.708438
EM: Round [89] log likelihood: -345275.707770
EM: Round [90] log likelihood: -345275.707128
EM: Round [91] log likelihood: -345275.706512
EM: Round [92] log likelihood: -345275.705919
EM: Round [93] log likelihood: -345275.705351
EM: Round [94] log likelihood: -345275.704804
EM: Round [95] log likelihood: -345275.704279
EM: Round [96] log likelihood: -345275.703775
EM: Round [97] log likelihood: -345275.703290
EM: Round [98] log likelihood: -345275.702825
EM: Round [99] log likelihood: -345275.702377
EM: Round [100] log likelihood: -345275.701947
EM: Round [101] log likelihood: -345275.701534
EM: Round [102] log likelihood: -345275.701137
EM: Round [103] log likelihood: -345275.700755
EM: Round [104] log likelihood: -345275.700388
EM: Round [105] log likelihood: -345275.700035
EM: Round [106] log likelihood: -345275.699696
EM: Round [107] log likelihood: -345275.699370
EM: Round [108] log likelihood: -345275.699056
EM: Round [109] log likelihood: -345275.698755
EM: Round [110] log likelihood: -345275.698465
EM: Round [111] log likelihood: -345275.698186
EM: Round [112] log likelihood: -345275.697918
EM: Round [113] log likelihood: -345275.697661
EM: Round [114] log likelihood: -345275.697413
EM: Round [115] log likelihood: -345275.697175
EM: Round [116] log likelihood: -345275.696945
EM: Round [117] log likelihood: -345275.696725
EM: Round [118] log likelihood: -345275.696513
EM: Round [119] log likelihood: -345275.696309
EM: Round [120] log likelihood: -345275.696112
EM: Round [121] log likelihood: -345275.695924
EM: Round [122] log likelihood: -345275.695742
EM: Round [123] log likelihood: -345275.695567
EM: Round [124] log likelihood: -345275.695399
EM: Round [125] log likelihood: -345275.695237
EM: Round [126] log likelihood: -345275.695082
EM: Round [127] log likelihood: -345275.694932
EM: Round [128] log likelihood: -345275.694788
EM: Round [129] log likelihood: -345275.694649
EM: Round [130] log likelihood: -345275.694516
EM: Round [131] log likelihood: -345275.694387
EM: Round [132] log likelihood: -345275.694264
EM: Round [133] log likelihood: -345275.694145
EM: Round [134] log likelihood: -345275.694030
EM: Round [135] log likelihood: -345275.693920
EM: Round [136] log likelihood: -345275.693814
EM: Round [137] log likelihood: -345275.693712
EM: Round [138] log likelihood: -345275.693613
EM: Stopping iterations at round 138 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 98837000 > /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir > /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir --annotate /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir
-done, see /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1776, filtered: 11224)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.P85UbqNjD2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.P85UbqNjD2/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000278975.1]
WARNING, no entry stored in dbm for [ENSG00000223823.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000284675.1]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000198237.8]
WARNING, no entry stored in dbm for [ENSG00000286458.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000265369.3]
WARNING, no entry stored in dbm for [ENSG00000214807.2]
WARNING, no entry stored in dbm for [ENSG00000226703.1]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000228221.6]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000250706.1]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000231952.3]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000237590.1]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000262898.3]
WARNING, no entry stored in dbm for [ENSG00000243980.3]
WARNING, no entry stored in dbm for [ENSG00000263740.2]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000250742.4]
WARNING, no entry stored in dbm for [ENSG00000277741.4]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000271162.1]
WARNING, no entry stored in dbm for [ENSG00000186543.7]
WARNING, no entry stored in dbm for [ENSG00000259755.1]
WARNING, no entry stored in dbm for [ENSG00000260855.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000231416.1]
WARNING, no entry stored in dbm for [ENSG00000240509.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000269888.1]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000269888.1]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000267707.2]
WARNING, no entry stored in dbm for [ENSG00000261669.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000228543.1]
WARNING, no entry stored in dbm for [ENSG00000279232.2]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000253438.4]
WARNING, no entry stored in dbm for [ENSG00000239893.2]
WARNING, no entry stored in dbm for [ENSG00000259291.2]
WARNING, no entry stored in dbm for [ENSG00000226633.2]
WARNING, no entry stored in dbm for [ENSG00000150276.8]
WARNING, no entry stored in dbm for [ENSG00000235278.2]
WARNING, no entry stored in dbm for [ENSG00000235823.3]
WARNING, no entry stored in dbm for [ENSG00000272141.1]
WARNING, no entry stored in dbm for [ENSG00000280306.1]
WARNING, no entry stored in dbm for [ENSG00000152117.17]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000269821.1]
WARNING, no entry stored in dbm for [ENSG00000231881.2]
WARNING, no entry stored in dbm for [ENSG00000243352.3]
WARNING, no entry stored in dbm for [ENSG00000243562.3]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000260613.2]
WARNING, no entry stored in dbm for [ENSG00000236829.9]
WARNING, no entry stored in dbm for [ENSG00000226471.6]
WARNING, no entry stored in dbm for [ENSG00000261659.2]
WARNING, no entry stored in dbm for [ENSG00000287225.1]
WARNING, no entry stored in dbm for [ENSG00000230202.1]
WARNING, no entry stored in dbm for [ENSG00000204054.14]
WARNING, no entry stored in dbm for [ENSG00000241743.4]
WARNING, no entry stored in dbm for [ENSG00000248334.6]
WARNING, no entry stored in dbm for [ENSG00000226250.2]
WARNING, no entry stored in dbm for [ENSG00000213529.3]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000258066.1]
WARNING, no entry stored in dbm for [ENSG00000247796.3]
WARNING, no entry stored in dbm for [ENSG00000279910.1]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000248049.7]
WARNING, no entry stored in dbm for [ENSG00000241656.1]
WARNING, no entry stored in dbm for [ENSG00000241656.1]
WARNING, no entry stored in dbm for [ENSG00000240793.1]
WARNING, no entry stored in dbm for [ENSG00000241656.1]
WARNING, no entry stored in dbm for [ENSG00000243023.2]
WARNING, no entry stored in dbm for [ENSG00000241656.1]
WARNING, no entry stored in dbm for [ENSG00000182888.5]
WARNING, no entry stored in dbm for [ENSG00000267506.5]
WARNING, no entry stored in dbm for [ENSG00000243197.8]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000159247.13]
WARNING, no entry stored in dbm for [ENSG00000159247.13]
WARNING, no entry stored in dbm for [ENSG00000263335.1]
WARNING, no entry stored in dbm for [ENSG00000260714.1]
WARNING, no entry stored in dbm for [ENSG00000281103.2]
WARNING, no entry stored in dbm for [ENSG00000266651.1]
WARNING, no entry stored in dbm for [ENSG00000224614.2]
WARNING, no entry stored in dbm for [ENSG00000234028.3]
WARNING, no entry stored in dbm for [ENSG00000224281.5]
WARNING, no entry stored in dbm for [ENSG00000234645.3]
WARNING, no entry stored in dbm for [ENSG00000247828.8]
WARNING, no entry stored in dbm for [ENSG00000266904.6]
WARNING, no entry stored in dbm for [ENSG00000234911.2]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000235512.1]
WARNING, no entry stored in dbm for [ENSG00000237729.2]
WARNING, no entry stored in dbm for [ENSG00000280061.1]
WARNING, no entry stored in dbm for [ENSG00000261713.6]
WARNING, no entry stored in dbm for [ENSG00000248660.1]
WARNING, no entry stored in dbm for [ENSG00000205482.9]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000175061.18]
WARNING, no entry stored in dbm for [ENSG00000287763.1]
WARNING, no entry stored in dbm for [ENSG00000268364.2]
WARNING, no entry stored in dbm for [ENSG00000224081.9]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000224057.1]
WARNING, no entry stored in dbm for [ENSG00000213332.4]
WARNING, no entry stored in dbm for [ENSG00000225347.1]
WARNING, no entry stored in dbm for [ENSG00000226148.1]
WARNING, no entry stored in dbm for [ENSG00000235499.1]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000220161.4]
WARNING, no entry stored in dbm for [ENSG00000224523.1]
WARNING, no entry stored in dbm for [ENSG00000233708.1]
WARNING, no entry stored in dbm for [ENSG00000233806.7]
WARNING, no entry stored in dbm for [ENSG00000247950.7]
WARNING, no entry stored in dbm for [ENSG00000255108.1]
WARNING, no entry stored in dbm for [ENSG00000185986.12]
WARNING, no entry stored in dbm for [ENSG00000244701.1]
WARNING, no entry stored in dbm for [ENSG00000249661.1]
WARNING, no entry stored in dbm for [ENSG00000245275.8]
WARNING, no entry stored in dbm for [ENSG00000287882.1]
WARNING, no entry stored in dbm for [ENSG00000213144.2]
WARNING, no entry stored in dbm for [ENSG00000219253.1]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000214535.3]
WARNING, no entry stored in dbm for [ENSG00000228453.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000242423.2]
WARNING, no entry stored in dbm for [ENSG00000199849.1]
WARNING, no entry stored in dbm for [ENSG00000207065.1]
WARNING, no entry stored in dbm for [ENSG00000240606.3]
WARNING, no entry stored in dbm for [ENSG00000202058.1]
WARNING, no entry stored in dbm for [ENSG00000231259.5]
WARNING, no entry stored in dbm for [ENSG00000245526.11]
WARNING, no entry stored in dbm for [ENSG00000239190.1]
WARNING, no entry stored in dbm for [ENSG00000278834.1]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000215477.2]
WARNING, no entry stored in dbm for [ENSG00000258427.3]
WARNING, no entry stored in dbm for [ENSG00000214184.3]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000267107.8]
WARNING, no entry stored in dbm for [ENSG00000285835.1]
WARNING, no entry stored in dbm for [ENSG00000246067.8]
WARNING, no entry stored in dbm for [ENSG00000237115.2]
WARNING, no entry stored in dbm for [ENSG00000227418.6]
WARNING, no entry stored in dbm for [ENSG00000241472.7]
WARNING, no entry stored in dbm for [ENSG00000254463.1]
WARNING, no entry stored in dbm for [ENSG00000204434.6]
WARNING, no entry stored in dbm for [ENSG00000230409.3]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000225777.1]
WARNING, no entry stored in dbm for [ENSG00000067601.8]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000258699.1]
WARNING, no entry stored in dbm for [ENSG00000228038.1]
WARNING, no entry stored in dbm for [ENSG00000259203.2]
WARNING, no entry stored in dbm for [ENSG00000175611.12]
WARNING, no entry stored in dbm for [ENSG00000286679.1]
WARNING, no entry stored in dbm for [ENSG00000282728.1]
WARNING, no entry stored in dbm for [ENSG00000286847.1]
WARNING, no entry stored in dbm for [ENSG00000247774.7]
WARNING, no entry stored in dbm for [ENSG00000285735.2]
WARNING, no entry stored in dbm for [ENSG00000229386.3]
WARNING, no entry stored in dbm for [ENSG00000224709.2]
WARNING, no entry stored in dbm for [ENSG00000254896.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000244230.3]
WARNING, no entry stored in dbm for [ENSG00000279945.1]
WARNING, no entry stored in dbm for [ENSG00000249752.1]
WARNING, no entry stored in dbm for [ENSG00000200708.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000223438.1]
WARNING, no entry stored in dbm for [ENSG00000223438.1]
WARNING, no entry stored in dbm for [ENSG00000223438.1]
WARNING, no entry stored in dbm for [ENSG00000223438.1]
WARNING, no entry stored in dbm for [ENSG00000223438.1]
WARNING, no entry stored in dbm for [ENSG00000179978.11]
WARNING, no entry stored in dbm for [ENSG00000286071.1]
WARNING, no entry stored in dbm for [ENSG00000259045.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000251141.6]
WARNING, no entry stored in dbm for [ENSG00000251141.6]
WARNING, no entry stored in dbm for [ENSG00000258488.2]
WARNING, no entry stored in dbm for [ENSG00000226013.1]
WARNING, no entry stored in dbm for [ENSG00000287624.1]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
WARNING, no entry stored in dbm for [ENSG00000283805.1]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000221533.1]
WARNING, no entry stored in dbm for [ENSG00000253642.6]
WARNING, no entry stored in dbm for [ENSG00000228327.3]
WARNING, no entry stored in dbm for [ENSG00000239906.1]
WARNING, no entry stored in dbm for [ENSG00000273356.1]
WARNING, no entry stored in dbm for [ENSG00000231758.3]
WARNING, no entry stored in dbm for [ENSG00000225022.1]
WARNING, no entry stored in dbm for [ENSG00000272906.1]
WARNING, no entry stored in dbm for [ENSG00000214223.4]
WARNING, no entry stored in dbm for [ENSG00000231969.2]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000239827.8]
WARNING, no entry stored in dbm for [ENSG00000254815.6]
WARNING, no entry stored in dbm for [ENSG00000267519.6]
WARNING, no entry stored in dbm for [ENSG00000247675.7]
WARNING, no entry stored in dbm for [ENSG00000175779.4]
WARNING, no entry stored in dbm for [ENSG00000249699.1]
WARNING, no entry stored in dbm for [ENSG00000249203.2]
WARNING, no entry stored in dbm for [ENSG00000220804.8]
WARNING, no entry stored in dbm for [ENSG00000198526.7]
WARNING, no entry stored in dbm for [ENSG00000225942.1]
WARNING, no entry stored in dbm for [ENSG00000267530.3]
WARNING, no entry stored in dbm for [ENSG00000261008.7]
WARNING, no entry stored in dbm for [ENSG00000255171.7]
WARNING, no entry stored in dbm for [ENSG00000233806.7]
WARNING, no entry stored in dbm for [ENSG00000220804.8]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000272274.2]
WARNING, no entry stored in dbm for [ENSG00000246662.6]
WARNING, no entry stored in dbm for [ENSG00000236790.6]
WARNING, no entry stored in dbm for [ENSG00000231672.8]
WARNING, no entry stored in dbm for [ENSG00000260126.2]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000218347.2]
WARNING, no entry stored in dbm for [ENSG00000223566.1]
WARNING, no entry stored in dbm for [ENSG00000228384.4]
WARNING, no entry stored in dbm for [ENSG00000163016.10]
WARNING, no entry stored in dbm for [ENSG00000260473.2]
WARNING, no entry stored in dbm for [ENSG00000254777.5]
WARNING, no entry stored in dbm for [ENSG00000272758.6]
WARNING, no entry stored in dbm for [ENSG00000237782.3]
WARNING, no entry stored in dbm for [ENSG00000224617.1]
WARNING, no entry stored in dbm for [ENSG00000197536.11]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000213362.3]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000205940.8]
WARNING, no entry stored in dbm for [ENSG00000231434.1]
WARNING, no entry stored in dbm for [ENSG00000230148.8]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000240376.1]
WARNING, no entry stored in dbm for [ENSG00000215492.6]
WARNING, no entry stored in dbm for [ENSG00000236539.3]
WARNING, no entry stored in dbm for [ENSG00000231711.2]
WARNING, no entry stored in dbm for [ENSG00000248785.1]
WARNING, no entry stored in dbm for [ENSG00000233299.1]
WARNING, no entry stored in dbm for [ENSG00000261716.2]
WARNING, no entry stored in dbm for [ENSG00000220323.4]
WARNING, no entry stored in dbm for [ENSG00000253203.6]
WARNING, no entry stored in dbm for [ENSG00000224458.3]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000247498.10]
WARNING, no entry stored in dbm for [ENSG00000267515.1]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000213598.4]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000231907.2]
WARNING, no entry stored in dbm for [ENSG00000259006.1]
WARNING, no entry stored in dbm for [ENSG00000255471.1]
WARNING, no entry stored in dbm for [ENSG00000224786.2]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000251141.6]
WARNING, no entry stored in dbm for [ENSG00000230472.5]
WARNING, no entry stored in dbm for [ENSG00000240253.6]
WARNING, no entry stored in dbm for [ENSG00000249854.3]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000234456.8]
WARNING, no entry stored in dbm for [ENSG00000232063.2]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000251634.2]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000234690.7]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000271913.7]
WARNING, no entry stored in dbm for [ENSG00000279085.1]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000223903.1]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000259057.1]
WARNING, no entry stored in dbm for [ENSG00000229140.11]
WARNING, no entry stored in dbm for [ENSG00000261439.1]
WARNING, no entry stored in dbm for [ENSG00000285018.1]
WARNING, no entry stored in dbm for [ENSG00000267395.5]
WARNING, no entry stored in dbm for [ENSG00000235823.3]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000279243.3]
WARNING, no entry stored in dbm for [ENSG00000236567.2]
WARNING, no entry stored in dbm for [ENSG00000279794.1]
WARNING, no entry stored in dbm for [ENSG00000154198.14]
WARNING, no entry stored in dbm for [ENSG00000271711.1]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000284809.1]
WARNING, no entry stored in dbm for [ENSG00000261801.6]
WARNING, no entry stored in dbm for [ENSG00000237772.2]
WARNING, no entry stored in dbm for [ENSG00000272933.1]
WARNING, no entry stored in dbm for [ENSG00000260750.7]
WARNING, no entry stored in dbm for [ENSG00000267493.4]
WARNING, no entry stored in dbm for [ENSG00000286119.1]
WARNING, no entry stored in dbm for [ENSG00000273032.3]
WARNING, no entry stored in dbm for [ENSG00000274020.4]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000205464.13]
WARNING, no entry stored in dbm for [ENSG00000258754.8]
WARNING, no entry stored in dbm for [ENSG00000279433.1]
WARNING, no entry stored in dbm for [ENSG00000226054.2]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000226397.8]
WARNING, no entry stored in dbm for [ENSG00000270497.1]
WARNING, no entry stored in dbm for [ENSG00000243439.3]
WARNING, no entry stored in dbm for [ENSG00000258057.6]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000286176.2]
WARNING, no entry stored in dbm for [ENSG00000224081.9]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000253542.7]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000228799.6]
WARNING, no entry stored in dbm for [ENSG00000236017.8]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000226258.7]
WARNING, no entry stored in dbm for [ENSG00000235192.1]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000214198.8]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000284639.1]
WARNING, no entry stored in dbm for [ENSG00000232677.9]
WARNING, no entry stored in dbm for [ENSG00000265399.1]
WARNING, no entry stored in dbm for [ENSG00000263618.5]
WARNING, no entry stored in dbm for [ENSG00000265786.1]
WARNING, no entry stored in dbm for [ENSG00000263618.5]
WARNING, no entry stored in dbm for [ENSG00000263618.5]
WARNING, no entry stored in dbm for [ENSG00000263618.5]
WARNING, no entry stored in dbm for [ENSG00000245970.2]
WARNING, no entry stored in dbm for [ENSG00000288018.1]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000254614.2]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000245498.7]
WARNING, no entry stored in dbm for [ENSG00000283633.1]
WARNING, no entry stored in dbm for [ENSG00000255234.6]
WARNING, no entry stored in dbm for [ENSG00000237729.2]
WARNING, no entry stored in dbm for [ENSG00000286017.1]
WARNING, no entry stored in dbm for [ENSG00000206788.1]
WARNING, no entry stored in dbm for [ENSG00000205794.4]
WARNING, no entry stored in dbm for [ENSG00000287299.1]
WARNING, no entry stored in dbm for [ENSG00000285847.2]
WARNING, no entry stored in dbm for [ENSG00000272540.1]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000286747.1]
WARNING, no entry stored in dbm for [ENSG00000272668.2]
WARNING, no entry stored in dbm for [ENSG00000228971.3]
WARNING, no entry stored in dbm for [ENSG00000232295.7]
WARNING, no entry stored in dbm for [ENSG00000228506.2]
WARNING, no entry stored in dbm for [ENSG00000276997.4]
WARNING, no entry stored in dbm for [ENSG00000283480.1]
WARNING, no entry stored in dbm for [ENSG00000287811.1]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000235020.5]
WARNING, no entry stored in dbm for [ENSG00000213058.3]
WARNING, no entry stored in dbm for [ENSG00000287516.1]
WARNING, no entry stored in dbm for [ENSG00000100181.22]
WARNING, no entry stored in dbm for [ENSG00000227355.3]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000271551.2]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000203620.2]
WARNING, no entry stored in dbm for [ENSG00000287925.1]
WARNING, no entry stored in dbm for [ENSG00000225032.5]
WARNING, no entry stored in dbm for [ENSG00000233727.1]
WARNING, no entry stored in dbm for [ENSG00000275834.1]
WARNING, no entry stored in dbm for [ENSG00000262412.1]
WARNING, no entry stored in dbm for [ENSG00000258464.2]
WARNING, no entry stored in dbm for [ENSG00000258464.2]
WARNING, no entry stored in dbm for [ENSG00000275880.1]
WARNING, no entry stored in dbm for [ENSG00000228436.3]
WARNING, no entry stored in dbm for [ENSG00000234426.3]
WARNING, no entry stored in dbm for [ENSG00000280296.1]
WARNING, no entry stored in dbm for [ENSG00000226644.5]
WARNING, no entry stored in dbm for [ENSG00000258414.1]
WARNING, no entry stored in dbm for [ENSG00000258414.1]
WARNING, no entry stored in dbm for [ENSG00000286999.1]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000224066.1]
WARNING, no entry stored in dbm for [ENSG00000231113.2]
WARNING, no entry stored in dbm for [ENSG00000227775.3]
WARNING, no entry stored in dbm for [ENSG00000213309.3]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000225783.8]
WARNING, no entry stored in dbm for [ENSG00000248734.2]
WARNING, no entry stored in dbm for [ENSG00000273628.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000287354.1]
WARNING, no entry stored in dbm for [ENSG00000237017.1]
WARNING, no entry stored in dbm for [ENSG00000223804.5]
WARNING, no entry stored in dbm for [ENSG00000237550.5]
WARNING, no entry stored in dbm for [ENSG00000237550.5]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000271644.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277304.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000260592.1]
WARNING, no entry stored in dbm for [ENSG00000259925.1]
WARNING, no entry stored in dbm for [ENSG00000279152.1]
WARNING, no entry stored in dbm for [ENSG00000258232.2]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000260710.1]
WARNING, no entry stored in dbm for [ENSG00000188850.9]
WARNING, no entry stored in dbm for [ENSG00000214657.4]
WARNING, no entry stored in dbm for [ENSG00000235421.1]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000260874.5]
WARNING, no entry stored in dbm for [ENSG00000266120.1]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000247193.3]
WARNING, no entry stored in dbm for [ENSG00000246582.3]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000213362.3]
WARNING, no entry stored in dbm for [ENSG00000279620.1]
WARNING, no entry stored in dbm for [ENSG00000279333.1]
WARNING, no entry stored in dbm for [ENSG00000286046.1]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000250501.3]
WARNING, no entry stored in dbm for [ENSG00000287645.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000285681.2]
WARNING, no entry stored in dbm for [ENSG00000285581.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000272941.1]
WARNING, no entry stored in dbm for [ENSG00000259605.3]
WARNING, no entry stored in dbm for [ENSG00000249142.1]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000236297.1]
WARNING, no entry stored in dbm for [ENSG00000228502.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000250939.2]
WARNING, no entry stored in dbm for [ENSG00000223703.1]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000224713.4]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000259397.3]
WARNING, no entry stored in dbm for [ENSG00000186019.11]
WARNING, no entry stored in dbm for [ENSG00000268516.2]
WARNING, no entry stored in dbm for [ENSG00000279569.1]
WARNING, no entry stored in dbm for [ENSG00000253764.3]
WARNING, no entry stored in dbm for [ENSG00000213963.6]
WARNING, no entry stored in dbm for [ENSG00000231409.3]
WARNING, no entry stored in dbm for [ENSG00000235619.1]
WARNING, no entry stored in dbm for [ENSG00000267062.1]
WARNING, no entry stored in dbm for [ENSG00000226287.8]
WARNING, no entry stored in dbm for [ENSG00000268636.1]
WARNING, no entry stored in dbm for [ENSG00000269025.2]
WARNING, no entry stored in dbm for [ENSG00000267512.1]
WARNING, no entry stored in dbm for [ENSG00000286068.1]
WARNING, no entry stored in dbm for [ENSG00000286790.1]
WARNING, no entry stored in dbm for [ENSG00000268282.1]
WARNING, no entry stored in dbm for [ENSG00000226266.6]
WARNING, no entry stored in dbm for [ENSG00000253133.2]
WARNING, no entry stored in dbm for [ENSG00000238207.2]
WARNING, no entry stored in dbm for [ENSG00000250685.7]
WARNING, no entry stored in dbm for [ENSG00000241183.1]
WARNING, no entry stored in dbm for [ENSG00000268204.1]
WARNING, no entry stored in dbm for [ENSG00000271792.1]
WARNING, no entry stored in dbm for [ENSG00000255875.2]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000255983.1]
WARNING, no entry stored in dbm for [ENSG00000269968.1]
WARNING, no entry stored in dbm for [ENSG00000269968.1]
WARNING, no entry stored in dbm for [ENSG00000227719.1]
WARNING, no entry stored in dbm for [ENSG00000267469.1]
WARNING, no entry stored in dbm for [ENSG00000266368.1]
WARNING, no entry stored in dbm for [ENSG00000256210.3]
WARNING, no entry stored in dbm for [ENSG00000228421.2]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000233760.2]
WARNING, no entry stored in dbm for [ENSG00000287967.1]
WARNING, no entry stored in dbm for [ENSG00000287967.1]
WARNING, no entry stored in dbm for [ENSG00000286896.1]
WARNING, no entry stored in dbm for [ENSG00000277283.1]
WARNING, no entry stored in dbm for [ENSG00000274177.1]
WARNING, no entry stored in dbm for [ENSG00000196656.7]
WARNING, no entry stored in dbm for [ENSG00000236880.1]
WARNING, no entry stored in dbm for [ENSG00000263325.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
* STAR-Fusion complete. See output: /tmp/nxf.P85UbqNjD2/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)