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HCC1395_tumor.mosdepth.summary.txt
Full Path
s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_cnv/daq_exclude_controls/daq-exclude-ctrl-20260608-220255/reports/raw_qc/mosdepth/HCC1395_tumor/HCC1395_tumor.mosdepth.summary.txt
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8.4 KB
Workflow Run
daq-exclude-ctrl-20260608-220255
Published
Jun 08, 2026 3:14 PM

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chrom	length	bases	mean	min	max
chr1	248956422	27232	0.00	0	14
chr1_region	3663576	0	0.00	0	0
chr2	242193529	31492	0.00	0	40
chr2_region	2777773	1982	0.00	0	6
chr3	198295559	12794	0.00	0	2
chr3_region	2231327	0	0.00	0	0
chr4	190214555	13617	0.00	0	2
chr4_region	1469945	12	0.00	0	1
chr5	181538259	11557	0.00	0	2
chr5_region	1660322	0	0.00	0	0
chr6	170805979	9402	0.00	0	5
chr6_region	1968761	817	0.00	0	5
chr7	159345973	70703	0.00	0	146
chr7_region	1870893	56365	0.03	0	146
chr8	145138636	6632	0.00	0	2
chr8_region	1408364	0	0.00	0	0
chr9	138394717	16131	0.00	0	7
chr9_region	1628789	276	0.00	0	2
chr10	133797422	6171	0.00	0	2
chr10_region	1449809	0	0.00	0	0
chr11	135086622	8633	0.00	0	2
chr11_region	2141872	69	0.00	0	1
chr12	133275309	7716	0.00	0	2
chr12_region	2040720	156	0.00	0	1
chr13	114364328	93306	0.00	0	81
chr13_region	688709	210	0.00	0	5
chr14	107043718	6398	0.00	0	11
chr14_region	1181196	125	0.00	0	1
chr15	101991189	12649	0.00	0	20
chr15_region	1485647	6748	0.00	0	20
chr16	90338345	3615	0.00	0	2
chr16_region	1521806	0	0.00	0	0
chr17	83257441	3111	0.00	0	3
chr17_region	2153669	0	0.00	0	0
chr18	80373285	72299	0.00	0	36
chr18_region	614382	8134	0.01	0	25
chr19	58617616	2888	0.00	0	3
chr19_region	2326178	168	0.00	0	1
chr20	64444167	3934	0.00	0	3
chr20_region	862845	0	0.00	0	0
chr21	46709983	95792149	2.05	0	1956
chr21_region	394477	47976260	121.62	0	710
chr22	50818468	18240	0.00	0	21
chr22_region	827600	0	0.00	0	0
chrX	156040895	12656	0.00	0	3
chrX_region	1460570	0	0.00	0	0
chrY	57227415	3756	0.00	0	3
chrY_region	90643	0	0.00	0	0
chr1_KI270706v1_random	175055	17884	0.10	0	44
chr1_KI270706v1_random_region	0	0	0.00	0	0
chr1_KI270707v1_random	32032	918	0.03	0	3
chr1_KI270707v1_random_region	0	0	0.00	0	0
chr3_GL000221v1_random	155397	28549	0.18	0	10
chr3_GL000221v1_random_region	0	0	0.00	0	0
chr4_GL000008v2_random	209709	7098	0.03	0	14
chr4_GL000008v2_random_region	0	0	0.00	0	0
chr9_KI270719v1_random	176845	22893	0.13	0	40
chr9_KI270719v1_random_region	0	0	0.00	0	0
chr14_GL000009v2_random	201709	36655	0.18	0	40
chr14_GL000009v2_random_region	0	0	0.00	0	0
chr14_KI270722v1_random	194050	88	0.00	0	1
chr14_KI270722v1_random_region	0	0	0.00	0	0
chr14_GL000194v1_random	191469	38946	0.20	0	32
chr14_GL000194v1_random_region	0	0	0.00	0	0
chr14_KI270725v1_random	172810	2721	0.02	0	10
chr14_KI270725v1_random_region	0	0	0.00	0	0
chr15_KI270727v1_random	448248	2830	0.01	0	14
chr15_KI270727v1_random_region	0	0	0.00	0	0
chr17_GL000205v2_random	185591	13428	0.07	0	21
chr17_GL000205v2_random_region	0	0	0.00	0	0
chr17_KI270729v1_random	280839	308	0.00	0	1
chr17_KI270729v1_random_region	0	0	0.00	0	0
chr22_KI270733v1_random	179772	404573	2.25	0	399
chr22_KI270733v1_random_region	0	0	0.00	0	0
chr22_KI270736v1_random	181920	96	0.00	0	2
chr22_KI270736v1_random_region	0	0	0.00	0	0
chrUn_KI270442v1	392061	85	0.00	0	1
chrUn_KI270442v1_region	0	0	0.00	0	0
chrUn_KI270435v1	92983	77	0.00	0	1
chrUn_KI270435v1_region	0	0	0.00	0	0
chrUn_KI270438v1	112505	300	0.00	0	1
chrUn_KI270438v1_region	0	0	0.00	0	0
chrUn_KI270519v1	138126	402	0.00	0	1
chrUn_KI270519v1_region	0	0	0.00	0	0
chrUn_KI270579v1	31033	507	0.02	0	1
chrUn_KI270579v1_region	0	0	0.00	0	0
chrUn_KI270589v1	44474	137	0.00	0	1
chrUn_KI270589v1_region	0	0	0.00	0	0
chrUn_KI270582v1	6504	610	0.09	0	1
chrUn_KI270582v1_region	0	0	0.00	0	0
chrUn_GL000195v1	182896	89505	0.49	0	226
chrUn_GL000195v1_region	0	0	0.00	0	0
chrUn_GL000220v1	161802	394002	2.44	0	366
chrUn_GL000220v1_region	0	0	0.00	0	0
chrUn_GL000213v1	164239	65250	0.40	0	40
chrUn_GL000213v1_region	0	0	0.00	0	0
chrUn_KI270743v1	210658	539	0.00	0	1
chrUn_KI270743v1_region	0	0	0.00	0	0
chrUn_KI270744v1	168472	1096	0.01	0	5
chrUn_KI270744v1_region	0	0	0.00	0	0
chrUn_KI270746v1	66486	148344	2.23	0	95
chrUn_KI270746v1_region	0	0	0.00	0	0
chrUn_KI270749v1	158759	1044	0.01	0	2
chrUn_KI270749v1_region	0	0	0.00	0	0
chrUn_KI270750v1	148850	25661	0.17	0	29
chrUn_KI270750v1_region	0	0	0.00	0	0
chrUn_KI270751v1	150742	574	0.00	0	1
chrUn_KI270751v1_region	0	0	0.00	0	0
chrUn_KI270753v1	62944	1104	0.02	0	1
chrUn_KI270753v1_region	0	0	0.00	0	0
chrUn_KI270754v1	40191	769	0.02	0	2
chrUn_KI270754v1_region	0	0	0.00	0	0
chrUn_GL000214v1	137718	214	0.00	0	1
chrUn_GL000214v1_region	0	0	0.00	0	0
chrUn_KI270742v1	186739	21829	0.12	0	16
chrUn_KI270742v1_region	0	0	0.00	0	0
chrUn_GL000216v2	176608	370	0.00	0	1
chrUn_GL000216v2_region	0	0	0.00	0	0
chrUn_GL000218v1	161147	12194	0.08	0	15
chrUn_GL000218v1_region	0	0	0.00	0	0
chr2_KI270768v1_alt	110099	450	0.00	0	2
chr2_KI270768v1_alt_region	0	0	0.00	0	0
chr2_GL383522v1_alt	123821	900	0.01	0	6
chr2_GL383522v1_alt_region	0	0	0.00	0	0
chr3_KI270778v1_alt	248252	150	0.00	0	1
chr3_KI270778v1_alt_region	0	0	0.00	0	0
chr8_KI270810v1_alt	374415	522	0.00	0	2
chr8_KI270810v1_alt_region	0	0	0.00	0	0
chr8_KI270820v1_alt	36640	120	0.00	0	2
chr8_KI270820v1_alt_region	0	0	0.00	0	0
chr9_GL383542v1_alt	60032	244	0.00	0	2
chr9_GL383542v1_alt_region	0	0	0.00	0	0
chr10_GL383546v1_alt	309802	150	0.00	0	1
chr10_GL383546v1_alt_region	0	0	0.00	0	0
chr13_KI270840v1_alt	191684	146	0.00	0	1
chr13_KI270840v1_alt_region	0	0	0.00	0	0
chr14_KI270845v1_alt	180703	198	0.00	0	2
chr14_KI270845v1_alt_region	0	0	0.00	0	0
chr16_KI270853v1_alt	2659700	74	0.00	0	1
chr16_KI270853v1_alt_region	0	0	0.00	0	0
chr17_KI270857v1_alt	2877074	32	0.00	0	1
chr17_KI270857v1_alt_region	0	0	0.00	0	0
chr17_JH159146v1_alt	278131	242	0.00	0	2
chr17_JH159146v1_alt_region	0	0	0.00	0	0
chr17_GL000258v2_alt	1821992	46	0.00	0	1
chr17_GL000258v2_alt_region	0	0	0.00	0	0
chr17_KI270860v1_alt	178921	31	0.00	0	1
chr17_KI270860v1_alt_region	0	0	0.00	0	0
chr19_KI270868v1_alt	61734	49	0.00	0	1
chr19_KI270868v1_alt_region	0	0	0.00	0	0
chr21_GL383578v2_alt	63917	266	0.00	0	2
chr21_GL383578v2_alt_region	0	0	0.00	0	0
chr21_KI270874v1_alt	166743	600	0.00	0	2
chr21_KI270874v1_alt_region	0	0	0.00	0	0
chr21_KI270873v1_alt	143900	448	0.00	0	3
chr21_KI270873v1_alt_region	0	0	0.00	0	0
chr21_GL383579v2_alt	201197	260	0.00	0	1
chr21_GL383579v2_alt_region	0	0	0.00	0	0
chr21_GL383580v2_alt	74653	1469	0.02	0	7
chr21_GL383580v2_alt_region	0	0	0.00	0	0
chr21_GL383581v2_alt	116689	2093	0.02	0	5
chr21_GL383581v2_alt_region	0	0	0.00	0	0
chr21_KI270872v1_alt	82692	1404	0.02	0	4
chr21_KI270872v1_alt_region	0	0	0.00	0	0
chr4_KI270925v1_alt	555799	889	0.00	0	4
chr4_KI270925v1_alt_region	0	0	0.00	0	0
chr19_GL949752v1_alt	987100	107	0.00	0	2
chr19_GL949752v1_alt_region	0	0	0.00	0	0
chrUn_KN707656v1_decoy	1017	298	0.29	0	2
chrUn_KN707656v1_decoy_region	0	0	0.00	0	0
chrUn_KN707660v1_decoy	8410	280	0.03	0	2
chrUn_KN707660v1_decoy_region	0	0	0.00	0	0
chrUn_KN707661v1_decoy	5534	126	0.02	0	1
chrUn_KN707661v1_decoy_region	0	0	0.00	0	0
chrUn_KN707687v1_decoy	1136	478	0.42	0	4
chrUn_KN707687v1_decoy_region	0	0	0.00	0	0
chrUn_KN707740v1_decoy	10282	598	0.06	0	4
chrUn_KN707740v1_decoy_region	0	0	0.00	0	0
chrUn_KN707765v1_decoy	6020	142	0.02	0	2
chrUn_KN707765v1_decoy_region	0	0	0.00	0	0
chrUn_KN707809v1_decoy	3667	144	0.04	0	2
chrUn_KN707809v1_decoy_region	0	0	0.00	0	0
chrUn_KN707822v1_decoy	2575	300	0.12	0	2
chrUn_KN707822v1_decoy_region	0	0	0.00	0	0
chrUn_KN707862v1_decoy	16513	104	0.01	0	1
chrUn_KN707862v1_decoy_region	0	0	0.00	0	0
chrUn_KN707891v1_decoy	1143	596	0.52	0	4
chrUn_KN707891v1_decoy_region	0	0	0.00	0	0
chrUn_KN707896v1_decoy	33125	7649	0.23	0	9
chrUn_KN707896v1_decoy_region	0	0	0.00	0	0
chrUn_KN707926v1_decoy	1266	262	0.21	0	2
chrUn_KN707926v1_decoy_region	0	0	0.00	0	0
chrUn_KN707950v1_decoy	1095	166	0.15	0	1
chrUn_KN707950v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000031v1_decoy	5926	2594	0.44	0	14
chrUn_JTFH01000031v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000190v1_decoy	2691	295	0.11	0	2
chrUn_JTFH01000190v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000200v1_decoy	2632	555	0.21	0	3
chrUn_JTFH01000200v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000596v1_decoy	1402	272	0.19	0	2
chrUn_JTFH01000596v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000612v1_decoy	1379	300	0.22	0	2
chrUn_JTFH01000612v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000864v1_decoy	1083	2877	2.66	0	6
chrUn_JTFH01000864v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01001441v1_decoy	1554	300	0.19	0	2
chrUn_JTFH01001441v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01001459v1_decoy	1488	560	0.38	0	4
chrUn_JTFH01001459v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01001632v1_decoy	1126	248	0.22	0	1
chrUn_JTFH01001632v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01001680v1_decoy	1063	300	0.28	0	2
chrUn_JTFH01001680v1_decoy_region	0	0	0.00	0	0
HLA-C*03:02:01	2894	141	0.05	0	1
HLA-C*03:02:01_region	0	0	0.00	0	0
HLA-C*12:99	3349	141	0.04	0	1
HLA-C*12:99_region	0	0	0.00	0	0
total	3106075275	97619297	0.03	0	1956
total_region	37919873	48051322	1.27	0	710