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HCC1395_BL.mosdepth.summary.txt
Full Path
s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_cnv/daq_exclude_controls/daq-exclude-ctrl-20260608-220255/reports/raw_qc/mosdepth/HCC1395_BL/HCC1395_BL.mosdepth.summary.txt
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7.2 KB
Workflow Run
daq-exclude-ctrl-20260608-220255
Published
Jun 08, 2026 3:14 PM

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chrom	length	bases	mean	min	max
chr1	248956422	21569	0.00	0	4
chr1_region	3663576	0	0.00	0	0
chr2	242193529	29419	0.00	0	43
chr2_region	2777773	1054	0.00	0	4
chr3	198295559	13457	0.00	0	2
chr3_region	2231327	0	0.00	0	0
chr4	190214555	10188	0.00	0	2
chr4_region	1469945	75	0.00	0	1
chr5	181538259	10754	0.00	0	2
chr5_region	1660322	0	0.00	0	0
chr6	170805979	9244	0.00	0	2
chr6_region	1968761	237	0.00	0	2
chr7	159345973	53152	0.00	0	110
chr7_region	1870893	40092	0.02	0	110
chr8	145138636	8340	0.00	0	1
chr8_region	1408364	0	0.00	0	0
chr9	138394717	12366	0.00	0	4
chr9_region	1628789	80	0.00	0	1
chr10	133797422	5915	0.00	0	3
chr10_region	1449809	0	0.00	0	0
chr11	135086622	6077	0.00	0	3
chr11_region	2141872	0	0.00	0	0
chr12	133275309	4667	0.00	0	2
chr12_region	2040720	77	0.00	0	1
chr13	114364328	90313	0.00	0	84
chr13_region	688709	257	0.00	0	5
chr14	107043718	4413	0.00	0	10
chr14_region	1181196	73	0.00	0	1
chr15	101991189	13628	0.00	0	16
chr15_region	1485647	6430	0.00	0	16
chr16	90338345	2857	0.00	0	2
chr16_region	1521806	0	0.00	0	0
chr17	83257441	2013	0.00	0	2
chr17_region	2153669	0	0.00	0	0
chr18	80373285	42987	0.00	0	20
chr18_region	614382	4231	0.01	0	10
chr19	58617616	2152	0.00	0	2
chr19_region	2326178	178	0.00	0	2
chr20	64444167	4135	0.00	0	2
chr20_region	862845	0	0.00	0	0
chr21	46709983	100308382	2.15	0	1659
chr21_region	394477	51067833	129.46	0	840
chr22	50818468	23853	0.00	0	24
chr22_region	827600	0	0.00	0	0
chrX	156040895	12477	0.00	0	2
chrX_region	1460570	0	0.00	0	0
chrY	57227415	1489	0.00	0	3
chrY_region	90643	0	0.00	0	0
chr1_KI270706v1_random	175055	10545	0.06	0	28
chr1_KI270706v1_random_region	0	0	0.00	0	0
chr1_KI270707v1_random	32032	397	0.01	0	2
chr1_KI270707v1_random_region	0	0	0.00	0	0
chr1_KI270710v1_random	40176	300	0.01	0	1
chr1_KI270710v1_random_region	0	0	0.00	0	0
chr3_GL000221v1_random	155397	21748	0.14	0	6
chr3_GL000221v1_random_region	0	0	0.00	0	0
chr4_GL000008v2_random	209709	3929	0.02	0	10
chr4_GL000008v2_random_region	0	0	0.00	0	0
chr9_KI270719v1_random	176845	23414	0.13	0	40
chr9_KI270719v1_random_region	0	0	0.00	0	0
chr14_GL000009v2_random	201709	24959	0.12	0	26
chr14_GL000009v2_random_region	0	0	0.00	0	0
chr14_GL000194v1_random	191469	22784	0.12	0	24
chr14_GL000194v1_random_region	0	0	0.00	0	0
chr14_KI270725v1_random	172810	1310	0.01	0	3
chr14_KI270725v1_random_region	0	0	0.00	0	0
chr15_KI270727v1_random	448248	4802	0.01	0	18
chr15_KI270727v1_random_region	0	0	0.00	0	0
chr17_GL000205v2_random	185591	6386	0.03	0	6
chr17_GL000205v2_random_region	0	0	0.00	0	0
chr22_KI270733v1_random	179772	395418	2.20	0	336
chr22_KI270733v1_random_region	0	0	0.00	0	0
chr22_KI270736v1_random	181920	78	0.00	0	1
chr22_KI270736v1_random_region	0	0	0.00	0	0
chrUn_KI270435v1	92983	300	0.00	0	1
chrUn_KI270435v1_region	0	0	0.00	0	0
chrUn_KI270519v1	138126	136	0.00	0	1
chrUn_KI270519v1_region	0	0	0.00	0	0
chrUn_KI270579v1	31033	380	0.01	0	1
chrUn_KI270579v1_region	0	0	0.00	0	0
chrUn_KI270582v1	6504	663	0.10	0	3
chrUn_KI270582v1_region	0	0	0.00	0	0
chrUn_GL000195v1	182896	56355	0.31	0	128
chrUn_GL000195v1_region	0	0	0.00	0	0
chrUn_GL000220v1	161802	387756	2.40	0	339
chrUn_GL000220v1_region	0	0	0.00	0	0
chrUn_GL000213v1	164239	64180	0.39	0	41
chrUn_GL000213v1_region	0	0	0.00	0	0
chrUn_KI270743v1	210658	1193	0.01	0	1
chrUn_KI270743v1_region	0	0	0.00	0	0
chrUn_KI270744v1	168472	1284	0.01	0	5
chrUn_KI270744v1_region	0	0	0.00	0	0
chrUn_KI270746v1	66486	89007	1.34	0	77
chrUn_KI270746v1_region	0	0	0.00	0	0
chrUn_KI270749v1	158759	429	0.00	0	2
chrUn_KI270749v1_region	0	0	0.00	0	0
chrUn_KI270750v1	148850	21088	0.14	0	25
chrUn_KI270750v1_region	0	0	0.00	0	0
chrUn_KI270751v1	150742	403	0.00	0	1
chrUn_KI270751v1_region	0	0	0.00	0	0
chrUn_KI270753v1	62944	135	0.00	0	1
chrUn_KI270753v1_region	0	0	0.00	0	0
chrUn_KI270754v1	40191	960	0.02	0	2
chrUn_KI270754v1_region	0	0	0.00	0	0
chrUn_GL000214v1	137718	367	0.00	0	1
chrUn_GL000214v1_region	0	0	0.00	0	0
chrUn_KI270742v1	186739	22787	0.12	0	8
chrUn_KI270742v1_region	0	0	0.00	0	0
chrUn_GL000216v2	176608	234	0.00	0	1
chrUn_GL000216v2_region	0	0	0.00	0	0
chrUn_GL000218v1	161147	7713	0.05	0	12
chrUn_GL000218v1_region	0	0	0.00	0	0
chr1_GL383519v1_alt	110268	148	0.00	0	1
chr1_GL383519v1_alt_region	0	0	0.00	0	0
chr13_KI270840v1_alt	191684	410	0.00	0	2
chr13_KI270840v1_alt_region	0	0	0.00	0	0
chr21_GL383578v2_alt	63917	748	0.01	0	2
chr21_GL383578v2_alt_region	0	0	0.00	0	0
chr21_KI270874v1_alt	166743	1091	0.01	0	6
chr21_KI270874v1_alt_region	0	0	0.00	0	0
chr21_KI270873v1_alt	143900	170	0.00	0	2
chr21_KI270873v1_alt_region	0	0	0.00	0	0
chr21_GL383579v2_alt	201197	107	0.00	0	1
chr21_GL383579v2_alt_region	0	0	0.00	0	0
chr21_GL383580v2_alt	74653	2524	0.03	0	10
chr21_GL383580v2_alt_region	0	0	0.00	0	0
chr21_GL383581v2_alt	116689	3544	0.03	0	12
chr21_GL383581v2_alt_region	0	0	0.00	0	0
chr21_KI270872v1_alt	82692	1531	0.02	0	4
chr21_KI270872v1_alt_region	0	0	0.00	0	0
chr4_KI270925v1_alt	555799	927	0.00	0	5
chr4_KI270925v1_alt_region	0	0	0.00	0	0
chr6_GL000252v2_alt	4604811	296	0.00	0	2
chr6_GL000252v2_alt_region	0	0	0.00	0	0
chr6_GL000253v2_alt	4677643	246	0.00	0	2
chr6_GL000253v2_alt_region	0	0	0.00	0	0
chr6_GL000255v2_alt	4606388	150	0.00	0	1
chr6_GL000255v2_alt_region	0	0	0.00	0	0
chrUn_KN707660v1_decoy	8410	671	0.08	0	3
chrUn_KN707660v1_decoy_region	0	0	0.00	0	0
chrUn_KN707687v1_decoy	1136	600	0.53	0	4
chrUn_KN707687v1_decoy_region	0	0	0.00	0	0
chrUn_KN707755v1_decoy	5343	300	0.06	0	2
chrUn_KN707755v1_decoy_region	0	0	0.00	0	0
chrUn_KN707784v1_decoy	3224	300	0.09	0	2
chrUn_KN707784v1_decoy_region	0	0	0.00	0	0
chrUn_KN707888v1_decoy	2424	290	0.12	0	1
chrUn_KN707888v1_decoy_region	0	0	0.00	0	0
chrUn_KN707889v1_decoy	1747	600	0.34	0	2
chrUn_KN707889v1_decoy_region	0	0	0.00	0	0
chrUn_KN707891v1_decoy	1143	798	0.70	0	4
chrUn_KN707891v1_decoy_region	0	0	0.00	0	0
chrUn_KN707896v1_decoy	33125	6163	0.19	0	6
chrUn_KN707896v1_decoy_region	0	0	0.00	0	0
chrUn_KN707903v1_decoy	6581	300	0.05	0	2
chrUn_KN707903v1_decoy_region	0	0	0.00	0	0
chrUn_KN707963v1_decoy	62955	190	0.00	0	2
chrUn_KN707963v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000031v1_decoy	5926	814	0.14	0	3
chrUn_JTFH01000031v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000200v1_decoy	2632	450	0.17	0	3
chrUn_JTFH01000200v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000366v1_decoy	1914	262	0.14	0	2
chrUn_JTFH01000366v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000623v1_decoy	1363	300	0.22	0	1
chrUn_JTFH01000623v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000631v1_decoy	1344	298	0.22	0	2
chrUn_JTFH01000631v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000864v1_decoy	1083	2343	2.16	0	5
chrUn_JTFH01000864v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01000920v1_decoy	1036	300	0.29	0	2
chrUn_JTFH01000920v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01001459v1_decoy	1488	600	0.40	0	4
chrUn_JTFH01001459v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01001465v1_decoy	1472	93	0.06	0	1
chrUn_JTFH01001465v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01001549v1_decoy	1283	150	0.12	0	1
chrUn_JTFH01001549v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01001581v1_decoy	1227	300	0.24	0	2
chrUn_JTFH01001581v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01001680v1_decoy	1063	93	0.09	0	1
chrUn_JTFH01001680v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01001705v1_decoy	1022	39	0.04	0	1
chrUn_JTFH01001705v1_decoy_region	0	0	0.00	0	0
chrUn_JTFH01001724v1_decoy	1009	150	0.15	0	1
chrUn_JTFH01001724v1_decoy_region	0	0	0.00	0	0
total	3108813796	101893583	0.03	0	1659
total_region	37919873	51120617	1.35	0	840