File Info
- Filename
- read_qc.FINAL_hotspot_list_07302025_hg38_sorted.bed.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_cnv/daq_exclude_controls/daq-exclude-ctrl-20260608-220255/reports/raw_qc/seqtool/HCC1395_tumor/HCC1395_tumor.md/read_qc.FINAL_hotspot_list_07302025_hg38_sorted.bed.tsv
- Size
- 563 bytes
- Workflow Run
- daq-exclude-ctrl-20260608-220255
- Published
- Jun 08, 2026 3:16 PM
Content
View in new tab| bam | reads | unmapped | frac_unmapped | unique_reads | frac_dupes | pairs | frac_reads_on_target | frac_reads_off_target | frac_pairs_on_target | frac_pairs_off_target | frag_size_q20 | frag_size_median | frag_size_q80 | proper_pairs | frac_proper_pairs | pairs_on_target | pairs_off_target | reads_on_target | reads_off_target | frag_size_mean | frag_size_std | dupes | n_q20 | n_q25 | n_q30 | n_bases |
| HCC1395_tumor.md.bam | 999980 | 4 | 0.000004 | 830860 | 0.169123 | 415427 | 0.000000 | 0.999995 | 0.000000 | 1.000000 | 159 | 265 | 414 | 414949 | 0.998849 | 0 | 414949 | 0 | 830856 | 291.923995 | 119.878181 | 169120 | 0.981974 | 0.949782 | 0.949782 | 143959508 |
2 rows