Sig_18_tissue_basic_stats.tsv

Filename: Sig_18_tissue_basic_stats.tsv
Full Path: s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_cnv/daq_exclude_controls/daq-exclude-ctrl-20260608-220255/reports/raw_qc/seqtool/Sig_18_tissue/Sig_18_tissue_basic_stats.tsv
Size: 1.3 KB
Workflow Run: daq-exclude-ctrl-20260608-220255
Published: Jun 08, 2026 3:16 PM

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
Sig_18_tissue.md	999980	8	8e-06	915604	0.084378	457797	0.73813	0.261861	0.803331	0.196669	138	218	335	457316	0.998949	367376	89940	675835	239761	241.867831	94.874466	84376	0.985166	0.958719	0.958719	141505598	xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed	36	0.009129	0.0	0.056549	0.0	0.052706	0.134961	0.321796	0.355793	0.714783	1.572856	1.063713	1.356436	0.866178	0.714468	0.702746	1.027469	0.688793	0.0	0.0	0.0	0.016551	0.0	1.323868	1.656403	843.0	0.0	0.0	0.0	0.0	27.0	0.996403	0.999941	374610	136300	0.009886	0.003597	37892425	0.0	66	-14.2855	-0.0008	37922265

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