File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/13/97e81d3658418f9068483ae304b96e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-v6xav2qj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:07,167 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:08,104 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:08,281 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:09,344 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:09,553 - cnv_pipe.batch.run_model - INFO - Processing cluster 1075 with 122 probes
2026-06-08 22:22:09,945 - cnv_pipe.batch.run_model.cluster1075 - INFO - Child process started for cluster 1075 with 122 probes
2026-06-08 22:22:48,567 - cnv_pipe.batch.run_model.cluster1075 - INFO - Child process finished cluster 1075. Wrote cluster_1075_samples.csv and cluster_1075_params.csv
2026-06-08 22:22:48,568 - cnv_pipe.batch.run_model - INFO - Cluster 1075 finished in 39.01 seconds. Status: SUCCESS