File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/e3214c057500d689aee31376cdc1e3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6aazl9__ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:45,632 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:46,427 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:46,599 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:47,638 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:47,836 - cnv_pipe.batch.run_model - INFO - Processing cluster 1449 with 91 probes
2026-06-08 22:23:48,207 - cnv_pipe.batch.run_model.cluster1449 - INFO - Child process started for cluster 1449 with 91 probes
2026-06-08 22:24:18,639 - cnv_pipe.batch.run_model.cluster1449 - INFO - Child process finished cluster 1449. Wrote cluster_1449_samples.csv and cluster_1449_params.csv
2026-06-08 22:24:18,640 - cnv_pipe.batch.run_model - INFO - Cluster 1449 finished in 30.80 seconds. Status: SUCCESS