File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d6/67f306c95f1da1ad48fe72df42b079/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5doxmt6e because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:46,180 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:47,043 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:47,215 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:48,205 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:48,373 - cnv_pipe.batch.run_model - INFO - Processing cluster 1409 with 194 probes
2026-06-08 22:23:48,746 - cnv_pipe.batch.run_model.cluster1409 - INFO - Child process started for cluster 1409 with 194 probes
2026-06-08 22:24:48,085 - cnv_pipe.batch.run_model.cluster1409 - INFO - Child process finished cluster 1409. Wrote cluster_1409_samples.csv and cluster_1409_params.csv
2026-06-08 22:24:48,089 - cnv_pipe.batch.run_model - INFO - Cluster 1409 finished in 59.72 seconds. Status: SUCCESS