File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/b9911bcc718a122087db221030b20b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oi5ottk6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:55,708 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:56,585 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:56,756 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:57,761 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:57,839 - cnv_pipe.batch.run_model - INFO - Processing cluster 1363 with 183 probes
2026-06-08 22:22:58,312 - cnv_pipe.batch.run_model.cluster1363 - INFO - Child process started for cluster 1363 with 183 probes
2026-06-08 22:23:56,755 - cnv_pipe.batch.run_model.cluster1363 - INFO - Child process finished cluster 1363. Wrote cluster_1363_samples.csv and cluster_1363_params.csv
2026-06-08 22:23:56,757 - cnv_pipe.batch.run_model - INFO - Cluster 1363 finished in 58.92 seconds. Status: SUCCESS