File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/f76f2fe9dd2eaf3d6238e0a68523d3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-drfu9v8g because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:34,317 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:35,587 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:35,875 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:37,613 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:37,862 - cnv_pipe.batch.run_model - INFO - Processing cluster 1496 with 158 probes
2026-06-08 22:23:38,474 - cnv_pipe.batch.run_model.cluster1496 - INFO - Child process started for cluster 1496 with 158 probes
2026-06-08 22:24:59,386 - cnv_pipe.batch.run_model.cluster1496 - INFO - Child process finished cluster 1496. Wrote cluster_1496_samples.csv and cluster_1496_params.csv
2026-06-08 22:24:59,389 - cnv_pipe.batch.run_model - INFO - Cluster 1496 finished in 81.53 seconds. Status: SUCCESS