File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/24e8dfb4d09ebf12923d4837905fd8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3y74bo_6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:07,205 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:08,035 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:08,208 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:09,179 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:09,351 - cnv_pipe.batch.run_model - INFO - Processing cluster 1547 with 198 probes
2026-06-08 22:24:09,724 - cnv_pipe.batch.run_model.cluster1547 - INFO - Child process started for cluster 1547 with 198 probes
2026-06-08 22:25:08,246 - cnv_pipe.batch.run_model.cluster1547 - INFO - Child process finished cluster 1547. Wrote cluster_1547_samples.csv and cluster_1547_params.csv
2026-06-08 22:25:08,247 - cnv_pipe.batch.run_model - INFO - Cluster 1547 finished in 58.90 seconds. Status: SUCCESS