File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/ffb9e897a0c484a6a9f2df30fe8f29/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hrtdz0jj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:00,183 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:01,199 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:01,374 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:02,476 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:02,702 - cnv_pipe.batch.run_model - INFO - Processing cluster 1391 with 172 probes
2026-06-08 22:23:03,087 - cnv_pipe.batch.run_model.cluster1391 - INFO - Child process started for cluster 1391 with 172 probes
2026-06-08 22:23:56,625 - cnv_pipe.batch.run_model.cluster1391 - INFO - Child process finished cluster 1391. Wrote cluster_1391_samples.csv and cluster_1391_params.csv
2026-06-08 22:23:56,627 - cnv_pipe.batch.run_model - INFO - Cluster 1391 finished in 53.92 seconds. Status: SUCCESS