File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/57/816a1e19fb51a1c7813aa04cdf4581/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jwfty76y because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:31,059 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:31,873 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:32,049 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:33,112 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:33,321 - cnv_pipe.batch.run_model - INFO - Processing cluster 1092 with 160 probes
2026-06-08 22:23:33,705 - cnv_pipe.batch.run_model.cluster1092 - INFO - Child process started for cluster 1092 with 160 probes
2026-06-08 22:24:23,298 - cnv_pipe.batch.run_model.cluster1092 - INFO - Child process finished cluster 1092. Wrote cluster_1092_samples.csv and cluster_1092_params.csv
2026-06-08 22:24:23,299 - cnv_pipe.batch.run_model - INFO - Cluster 1092 finished in 49.98 seconds. Status: SUCCESS