File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3a/71c7b3527107e584d93d20556a2384/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2m5ahvjw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:21:22,252 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:21:23,092 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:21:23,263 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:21:24,265 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:21:24,340 - cnv_pipe.batch.run_model - INFO - Processing cluster 806 with 72 probes
2026-06-08 22:21:24,841 - cnv_pipe.batch.run_model.cluster806 - INFO - Child process started for cluster 806 with 72 probes
2026-06-08 22:21:50,731 - cnv_pipe.batch.run_model.cluster806 - INFO - Child process finished cluster 806. Wrote cluster_806_samples.csv and cluster_806_params.csv
2026-06-08 22:21:50,731 - cnv_pipe.batch.run_model - INFO - Cluster 806 finished in 26.39 seconds. Status: SUCCESS