File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/171926888a0e7dfb30a4364fbb0a83/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yyqj4bwi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:21:39,135 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:21:39,981 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:21:40,156 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:21:41,290 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:21:41,364 - cnv_pipe.batch.run_model - INFO - Processing cluster 853 with 192 probes
2026-06-08 22:21:41,858 - cnv_pipe.batch.run_model.cluster853 - INFO - Child process started for cluster 853 with 192 probes
2026-06-08 22:22:41,735 - cnv_pipe.batch.run_model.cluster853 - INFO - Child process finished cluster 853. Wrote cluster_853_samples.csv and cluster_853_params.csv
2026-06-08 22:22:41,736 - cnv_pipe.batch.run_model - INFO - Cluster 853 finished in 60.37 seconds. Status: SUCCESS