File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/43/ae3f1405fdf07ca498d3b264c73aa5/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-m935w1f6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:11,189 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:12,066 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:12,239 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:13,213 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:13,389 - cnv_pipe.batch.run_model - INFO - Processing cluster 1458 with 190 probes
2026-06-08 22:23:13,770 - cnv_pipe.batch.run_model.cluster1458 - INFO - Child process started for cluster 1458 with 190 probes
2026-06-08 22:24:11,019 - cnv_pipe.batch.run_model.cluster1458 - INFO - Child process finished cluster 1458. Wrote cluster_1458_samples.csv and cluster_1458_params.csv
2026-06-08 22:24:11,020 - cnv_pipe.batch.run_model - INFO - Cluster 1458 finished in 57.63 seconds. Status: SUCCESS