File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/f6ae62a273ccade3ec8bd3bb6d7633/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gvhqisje because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:30,188 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:31,017 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:31,191 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:32,145 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:32,314 - cnv_pipe.batch.run_model - INFO - Processing cluster 815 with 193 probes
2026-06-08 22:23:32,713 - cnv_pipe.batch.run_model.cluster815 - INFO - Child process started for cluster 815 with 193 probes
2026-06-08 22:24:29,901 - cnv_pipe.batch.run_model.cluster815 - INFO - Child process finished cluster 815. Wrote cluster_815_samples.csv and cluster_815_params.csv
2026-06-08 22:24:29,902 - cnv_pipe.batch.run_model - INFO - Cluster 815 finished in 57.59 seconds. Status: SUCCESS