File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a7/f7b47a3ea95e95231a7e5c497d432c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jlt2ytah because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:32,995 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:33,863 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:34,036 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:35,149 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:35,383 - cnv_pipe.batch.run_model - INFO - Processing cluster 1063 with 190 probes
2026-06-08 22:22:35,779 - cnv_pipe.batch.run_model.cluster1063 - INFO - Child process started for cluster 1063 with 190 probes
2026-06-08 22:23:37,292 - cnv_pipe.batch.run_model.cluster1063 - INFO - Child process finished cluster 1063. Wrote cluster_1063_samples.csv and cluster_1063_params.csv
2026-06-08 22:23:37,294 - cnv_pipe.batch.run_model - INFO - Cluster 1063 finished in 61.91 seconds. Status: SUCCESS