File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/f5b330f603bb5e42ea1b8c972498a4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-a5uygq0w because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:56,065 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:56,878 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:57,049 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:58,049 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:58,235 - cnv_pipe.batch.run_model - INFO - Processing cluster 985 with 145 probes
2026-06-08 22:23:58,609 - cnv_pipe.batch.run_model.cluster985 - INFO - Child process started for cluster 985 with 145 probes
2026-06-08 22:24:42,352 - cnv_pipe.batch.run_model.cluster985 - INFO - Child process finished cluster 985. Wrote cluster_985_samples.csv and cluster_985_params.csv
2026-06-08 22:24:42,353 - cnv_pipe.batch.run_model - INFO - Cluster 985 finished in 44.12 seconds. Status: SUCCESS