File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/b0913e3c152e2c4b439a1df76426f9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-u9i3uqqw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:39,420 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:40,227 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:40,394 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:41,335 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:41,545 - cnv_pipe.batch.run_model - INFO - Processing cluster 1633 with 195 probes
2026-06-08 22:23:41,938 - cnv_pipe.batch.run_model.cluster1633 - INFO - Child process started for cluster 1633 with 195 probes
2026-06-08 22:24:37,665 - cnv_pipe.batch.run_model.cluster1633 - INFO - Child process finished cluster 1633. Wrote cluster_1633_samples.csv and cluster_1633_params.csv
2026-06-08 22:24:37,666 - cnv_pipe.batch.run_model - INFO - Cluster 1633 finished in 56.12 seconds. Status: SUCCESS