[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXFOnZQN/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXFOnZQN/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXFOnZQN/chr6_138229684-138229952.bed.gz.tbi
[2026-06-08T22:17:23.940754Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T22:17:23.941396Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T22:17:23.941408Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T22:17:23.941414Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T22:17:23.941418Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXFOnZQN'
[2026-06-08T22:17:23.941424Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T22:17:23.941430Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T22:17:23.941436Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T22:17:23.941446Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] [RunParameters] memMb: 1523801
[2026-06-08T22:17:23.941452Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T22:17:23.941457Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T22:17:23.941462Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T22:17:23.941467Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T22:17:23.941472Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T22:17:23.941847Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T22:17:23.941946Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T22:17:23.948800Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T22:17:23.949451Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T22:17:23.949530Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T22:17:23.949702Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T22:17:23.949944Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.950575Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.950689Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.950779Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.950929Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.951011Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.951444Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.951487Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.951678Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.951912Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.952194Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.952747Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.954345Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.954551Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T22:17:23.954990Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.955189Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.955337Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.955416Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.955556Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.955635Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.955889Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.955977Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.956115Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.956203Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.956522Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.956775Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.956918Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.956999Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.957132Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.957216Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.957352Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.957471Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.957620Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.957698Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.957938Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958318Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958459Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958542Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958679Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958761Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958898Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958973Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.959133Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.959212Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.959429Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.959918Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.960057Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.960133Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.960351Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.960439Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.960579Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.960659Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.960796Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.960872Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.961152Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.961661Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.961798Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.961895Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962030Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962108Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962249Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962325Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962463Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962543Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962765Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963343Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963478Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963556Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963691Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963771Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963904Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963981Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.964112Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.964192Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.965712Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.966370Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.966542Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.966634Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.966774Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.966860Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.967000Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.967076Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.967216Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.967294Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.967495Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.968215Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.968354Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.968441Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.968582Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.968659Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.968798Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.968880Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969014Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969094Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969278Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969431Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.970335Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.970416Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.970558Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.970638Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.970834Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.970912Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.971048Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.971129Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.971336Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.972211Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.972345Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.972423Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.972560Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.972638Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.975233Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.976129Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.976465Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.976550Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.991327Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.992380Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.992593Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.993667Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.993902Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.994272Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.994839Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.995096Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.995413Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.995813Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.996218Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.996522Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.997127Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.997413Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.997943Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.998803Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.999236Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T22:17:24.000114Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:17:24.002988Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-08T22:17:24.005079Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-08T22:17:24.007493Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-08T22:17:24.010150Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-08T22:17:24.013970Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-08T22:17:24.015803Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-08T22:17:24.018456Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-08T22:17:24.019363Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-08T22:17:24.019554Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T22:17:24.084816Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.085918Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.089439Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-08T22:17:24.089996Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.091079Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.094181Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-08T22:17:24.505322Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.506665Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.509785Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-08T22:17:25.021592Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.021657Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.022936Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.023177Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.026964Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-08T22:17:25.028494Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-08T22:17:25.087452Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.088638Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.091593Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-08T22:17:25.092219Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.093349Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.096553Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-08T22:17:25.125032Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.126241Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.129669Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-08T22:17:25.158332Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.159483Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.162947Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-08T22:17:25.191575Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.192700Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.196103Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-08T22:17:25.557411Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.558704Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.562315Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-08T22:17:25.723192Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.724293Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.727426Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-08T22:17:25.732178Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.733208Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.736214Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-08T22:17:25.765005Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.765058Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.766121Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.766379Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.770568Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-08T22:17:25.772345Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-08T22:17:26.131191Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.131281Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.132466Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.132773Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.136419Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-08T22:17:26.137537Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-08T22:17:26.197000Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.198160Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.201428Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-08T22:17:26.202171Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.203335Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.206561Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-08T22:17:26.868244Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.869425Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.872376Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-08T22:17:26.983588Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.984707Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.987620Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-08T22:17:27.048697Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.048766Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.049920Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.050261Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.053792Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-08T22:17:27.054996Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-08T22:17:27.082707Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.082776Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.083883Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.084146Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.087870Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-08T22:17:27.088968Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-08T22:17:27.116509Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.117656Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.120244Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-08T22:17:27.149399Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.149454Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.150449Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.150722Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.154156Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-08T22:17:27.154795Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.155154Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-08T22:17:27.156085Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.158714Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-08T22:17:27.187942Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.188018Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.189212Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.189456Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.190052Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.193013Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-08T22:17:27.195297Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.196046Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-08T22:17:27.198594Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-08T22:17:27.227696Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.228913Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.231742Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-08T22:17:27.643978Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.645242Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.648394Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-08T22:17:27.709287Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.709353Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.710343Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.710622Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.714314Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-08T22:17:27.715515Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-08T22:17:27.742918Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.744052Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.746991Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-08T22:17:27.808153Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.809254Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.811884Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-08T22:17:27.873209Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.873305Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.874472Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.874762Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.878613Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-08T22:17:27.879772Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-08T22:17:27.939255Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.940255Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.943282Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-08T22:17:28.054516Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.055705Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.058734Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-08T22:17:28.319967Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.320975Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.323976Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-08T22:17:28.352750Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.353680Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.356252Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-08T22:17:28.369308Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.370173Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.372883Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-08T22:17:28.385867Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.386739Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.389306Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-08T22:17:28.402406Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.403252Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.406361Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-08T22:17:29.018198Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.019255Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.022209Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-08T22:17:29.051098Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.051170Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.052086Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.052312Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.056383Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-08T22:17:29.057545Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-08T22:17:29.167357Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.168276Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.171254Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-08T22:17:29.282444Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.283368Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.286239Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-08T22:17:29.315174Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.316077Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.318832Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-08T22:17:29.379920Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.380878Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.383278Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-08T22:17:29.412706Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.413585Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.416072Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-08T22:17:29.445400Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.446340Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.448799Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-08T22:17:29.660403Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.660491Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.661829Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.662187Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.665285Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-08T22:17:29.666505Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-08T22:17:29.694428Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.694498Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.695897Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.696317Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.699468Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-08T22:17:29.700677Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-08T22:17:29.728502Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.728584Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.729925Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.730253Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.733265Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-08T22:17:29.734338Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-08T22:17:29.762419Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.763758Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.766252Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-08T22:17:29.827788Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.827871Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.828804Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.829033Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.831827Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-08T22:17:29.832912Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-08T22:17:29.860879Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.862101Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.862364Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.862446Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.863382Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.863711Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.869032Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-08T22:17:29.869342Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-08T22:17:29.928328Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.929124Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.931835Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-08T22:17:30.093097Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.093942Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.096696Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-08T22:17:30.125759Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.126530Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.129209Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-08T22:17:30.540855Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.541731Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.544273Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-08T22:17:30.573388Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.574092Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.576989Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-08T22:17:30.638060Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.638122Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.638834Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.639163Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.642080Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-08T22:17:30.643218Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-08T22:17:30.670991Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.671045Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.671730Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.671977Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.674968Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-08T22:17:30.675852Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-08T22:17:30.735936Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.735979Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.736640Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.736819Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.739303Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-08T22:17:30.740156Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-08T22:17:30.768507Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.769127Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.771318Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-08T22:17:30.800689Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.800740Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.801340Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.801553Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.804168Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-08T22:17:30.804888Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-08T22:17:30.833282Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.833911Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.836071Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-08T22:17:30.897566Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.898235Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.900803Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-08T22:17:30.930010Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.930751Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.933251Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-08T22:17:30.994480Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.994537Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.994565Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.995220Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.995537Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.995981Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.000078Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-08T22:17:31.000325Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-08T22:17:31.001238Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-08T22:17:31.028103Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.028148Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.028746Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.029072Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.029921Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.032450Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-08T22:17:31.032684Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.035435Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-08T22:17:31.036049Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-08T22:17:31.064496Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.064546Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.065110Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.065319Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.067906Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-08T22:17:31.069200Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-08T22:17:31.096959Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.097009Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.097537Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.097703Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.100521Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-08T22:17:31.101456Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-08T22:17:31.130381Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.130934Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.133575Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-08T22:17:31.162693Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.162739Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.163323Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.163530Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.166205Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-08T22:17:31.167567Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-08T22:17:31.227423Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.227462Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.227975Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.230521Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-08T22:17:31.259844Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.259909Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.260497Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.262155Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.262825Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.263030Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-08T22:17:31.265266Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-08T22:17:31.294571Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.294611Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.360109Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-08T22:17:31.408500Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.408936Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.410920Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-08T22:17:31.440482Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.440525Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.441042Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.443984Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-08T22:17:31.472764Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.137379Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.137846Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.140338Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-08T22:17:32.169472Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.483674Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.484166Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.486273Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-08T22:17:32.515814Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.516108Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.516211Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.516397Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.516765Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.520198Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T22:17:32.521349Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T22:17:32.522334Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T22:17:32.548607Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.548648Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.548836Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.549119Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.552221Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T22:17:32.553030Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.553219Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T22:17:32.584731Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.584765Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.584925Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.587245Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T22:17:32.616734Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:34.583227Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T22:17:42.829241Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T22:17:42.829241Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] 
[2026-06-08T22:17:42.829241Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T22:17:42.829292Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] 
[2026-06-08T22:17:42.829299Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T22:17:42.829308Z] [nf-bc318d1e43635ee8dd11e513d5607008-22942-gnn7k] [750_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec